Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Gm14921-201ENSMUST00000118643 908 ntBASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Gm13665-201ENSMUST00000120830 528 ntBASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Gm24845-201ENSMUST00000158034 109 ntBASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28729A0A1B0GSW2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.52□□□□□ -0.4
Gm28729A0A1B0GSW2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm28729A0A1B0GSW2 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Gm28729A0A1B0GSW2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm28729A0A1B0GSW2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm28729A0A1B0GSW2 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.52□□□□□ -0.4
Gm28729A0A1B0GSW2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm28729A0A1B0GSW2 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm28729A0A1B0GSW2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm28729A0A1B0GSW2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm28729A0A1B0GSW2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm28729A0A1B0GSW2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Gm12217-201ENSMUST00000118858 696 ntBASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Gm26361-201ENSMUST00000158868 186 ntBASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Mir5120-201ENSMUST00000175020 78 ntBASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28729A0A1B0GSW2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28729A0A1B0GSW2 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28729A0A1B0GSW2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28729A0A1B0GSW2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28729A0A1B0GSW2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28729A0A1B0GSW2 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Gm28729A0A1B0GSW2 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28729A0A1B0GSW2 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Gm28729A0A1B0GSW2 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28729A0A1B0GSW2 Gm4909-201ENSMUST00000118749 794 ntBASIC12.51□□□□□ -0.41
Gm28729A0A1B0GSW2 Gm14999-201ENSMUST00000121039 624 ntBASIC12.51□□□□□ -0.41
Gm28729A0A1B0GSW2 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Gm28729A0A1B0GSW2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.51□□□□□ -0.41
Gm28729A0A1B0GSW2 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms