Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp2aQ9DB34 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Gm13226-201ENSMUST00000117838 404 ntBASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Gm1335-201ENSMUST00000121653 386 ntBASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Mir1982-201ENSMUST00000157368 74 ntBASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Gm18062-201ENSMUST00000208020 547 ntBASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Gm18055-201ENSMUST00000208254 547 ntBASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp2aQ9DB34 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp2aQ9DB34 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp2aQ9DB34 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.46□□□□□ -0.26
Chmp2aQ9DB34 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.46□□□□□ -0.26
Chmp2aQ9DB34 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp2aQ9DB34 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Gm45784-201ENSMUST00000188360 142 ntBASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.45□□□□□ -0.26
Chmp2aQ9DB34 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms