Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Gm13689-201ENSMUST00000119360 685 ntBASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Gm24694-201ENSMUST00000180054 110 ntBASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Gm27663-201ENSMUST00000184839 110 ntBASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Gm18630-201ENSMUST00000222109 1397 ntBASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp5Q9D7S9 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Gm22189-201ENSMUST00000103822 86 ntBASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Gm45484-201ENSMUST00000210310 1141 ntBASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 AC173210.1-201ENSMUST00000222341 1131 ntBASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp5Q9D7S9 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Mir686-201ENSMUST00000102174 109 ntBASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Gm12151-201ENSMUST00000121374 290 ntBASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Gm5354-201ENSMUST00000182417 973 ntBASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Gm7730-201ENSMUST00000212486 454 ntBASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Gm13722-201ENSMUST00000117964 3066 ntBASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp5Q9D7S9 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Chmp5Q9D7S9 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp5Q9D7S9 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp5Q9D7S9 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp5Q9D7S9 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
Chmp5Q9D7S9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC16.08■□□□□ 0.17
Chmp5Q9D7S9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp5Q9D7S9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Chmp5Q9D7S9 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp5Q9D7S9 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp5Q9D7S9 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Chmp5Q9D7S9 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Chmp5Q9D7S9 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp5Q9D7S9 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp5Q9D7S9 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp5Q9D7S9 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.08■□□□□ 0.16
Chmp5Q9D7S9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Chmp5Q9D7S9 Gm15321-201ENSMUST00000121290 288 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms