Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.34□□□□□ -0.59
Scrt1Q99M85 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.34□□□□□ -0.59
Scrt1Q99M85 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.34□□□□□ -0.59
Scrt1Q99M85 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scrt1Q99M85 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Scrt1Q99M85 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.33□□□□□ -0.59
Scrt1Q99M85 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Scrt1Q99M85 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Scrt1Q99M85 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.33□□□□□ -0.6
Scrt1Q99M85 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Scrt1Q99M85 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.33□□□□□ -0.6
Scrt1Q99M85 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.33□□□□□ -0.6
Scrt1Q99M85 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Mir5120-201ENSMUST00000175020 78 ntBASIC11.33□□□□□ -0.6
Scrt1Q99M85 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.33□□□□□ -0.6
Scrt1Q99M85 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.33□□□□□ -0.6
Scrt1Q99M85 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.33□□□□□ -0.6
Scrt1Q99M85 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.33□□□□□ -0.6
Scrt1Q99M85 Morn2-202ENSMUST00000227729 656 ntBASIC11.33□□□□□ -0.6
Scrt1Q99M85 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scrt1Q99M85 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Gm12363-201ENSMUST00000122250 668 ntBASIC11.32□□□□□ -0.6
Scrt1Q99M85 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.32□□□□□ -0.6
Scrt1Q99M85 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.32□□□□□ -0.6
Scrt1Q99M85 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Gm2260-201ENSMUST00000184965 657 ntBASIC11.32□□□□□ -0.6
Scrt1Q99M85 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms