Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Gm6180-201ENSMUST00000065243 498 ntBASIC14.79□□□□□ -0.04
Smc2Q8CG48 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Smc2Q8CG48 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.78□□□□□ -0.04
Smc2Q8CG48 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.78□□□□□ -0.04
Smc2Q8CG48 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.78□□□□□ -0.04
Smc2Q8CG48 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Gm23984-201ENSMUST00000157139 203 ntBASIC14.78□□□□□ -0.04
Smc2Q8CG48 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.78□□□□□ -0.04
Smc2Q8CG48 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.78□□□□□ -0.04
Smc2Q8CG48 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.78□□□□□ -0.04
Smc2Q8CG48 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Smc2Q8CG48 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc2Q8CG48 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smc2Q8CG48 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smc2Q8CG48 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smc2Q8CG48 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smc2Q8CG48 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Smc2Q8CG48 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Smc2Q8CG48 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smc2Q8CG48 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Smc2Q8CG48 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Smc2Q8CG48 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smc2Q8CG48 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Smc2Q8CG48 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smc2Q8CG48 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Smc2Q8CG48 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smc2Q8CG48 Gm11618-201ENSMUST00000117946 267 ntBASIC14.77□□□□□ -0.05
Smc2Q8CG48 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.77□□□□□ -0.05
Smc2Q8CG48 Gm14928-201ENSMUST00000120198 477 ntBASIC14.77□□□□□ -0.05
Smc2Q8CG48 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.77□□□□□ -0.05
Smc2Q8CG48 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Smc2Q8CG48 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.77□□□□□ -0.05
Smc2Q8CG48 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.77□□□□□ -0.05
Smc2Q8CG48 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Smc2Q8CG48 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.77□□□□□ -0.05
Smc2Q8CG48 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc2Q8CG48 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc2Q8CG48 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc2Q8CG48 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc2Q8CG48 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc2Q8CG48 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Smc2Q8CG48 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.77□□□□□ -0.05
Smc2Q8CG48 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.77□□□□□ -0.05
Smc2Q8CG48 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms