Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm8199-201ENSMUST00000121323 823 ntBASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Aprt-ps-201ENSMUST00000212311 505 ntBASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 AC153954.1-201ENSMUST00000216959 255 ntBASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Chd4Q6PDQ2 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd4Q6PDQ2 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd4Q6PDQ2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd4Q6PDQ2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd4Q6PDQ2 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd4Q6PDQ2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd4Q6PDQ2 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd4Q6PDQ2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd4Q6PDQ2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd4Q6PDQ2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
Chd4Q6PDQ2 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.52■□□□□ 0.24
Chd4Q6PDQ2 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd4Q6PDQ2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd4Q6PDQ2 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC16.52■□□□□ 0.23
Chd4Q6PDQ2 Gm15711-201ENSMUST00000118889 535 ntBASIC16.52■□□□□ 0.23
Chd4Q6PDQ2 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chd4Q6PDQ2 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chd4Q6PDQ2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC16.52■□□□□ 0.23
Chd4Q6PDQ2 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC16.52■□□□□ 0.23
Chd4Q6PDQ2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd4Q6PDQ2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd4Q6PDQ2 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd4Q6PDQ2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd4Q6PDQ2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd4Q6PDQ2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Gm14760-201ENSMUST00000121831 999 ntBASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Gm807-202ENSMUST00000224929 408 ntBASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Gm19459-201ENSMUST00000176240 835 ntBASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd4Q6PDQ2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Gm18038-201ENSMUST00000197900 485 ntBASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Gm5051-201ENSMUST00000204085 485 ntBASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Gm10109-202ENSMUST00000206890 1211 ntBASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd4Q6PDQ2 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms