Protein–RNA interactions for Protein: Q5F4S9

Trpm3, Transient receptor potential cation channel, subfamily M, member 3, mousemouse

Predictions only

Length 1,721 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm3Q5F4S9 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Gm13045-201ENSMUST00000119019 712 ntBASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Gm17040-202ENSMUST00000170597 889 ntBASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Gm27552-201ENSMUST00000183351 62 ntBASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Gm27844-201ENSMUST00000183613 62 ntBASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Gm44065-201ENSMUST00000203184 3527 ntBASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Gm9361-201ENSMUST00000198695 1507 ntBASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trpm3Q5F4S9 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Ssr1-203ENSMUST00000225246 1825 ntBASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Gm44551-201ENSMUST00000208804 171 ntBASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Gm45433-201ENSMUST00000209386 247 ntBASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Gm9826-201ENSMUST00000029124 1299 ntBASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Gm13812-201ENSMUST00000118061 1347 ntBASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Gm13810-201ENSMUST00000118584 1347 ntBASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm3Q5F4S9 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm3Q5F4S9 Gm6335-201ENSMUST00000118081 1194 ntBASIC16.02■□□□□ 0.16
Trpm3Q5F4S9 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm3Q5F4S9 Gm7816-201ENSMUST00000119884 1194 ntBASIC16.02■□□□□ 0.16
Trpm3Q5F4S9 Gm15542-201ENSMUST00000121585 1194 ntBASIC16.02■□□□□ 0.16
Trpm3Q5F4S9 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC16.02■□□□□ 0.16
Trpm3Q5F4S9 Gm45219-201ENSMUST00000205602 465 ntBASIC16.02■□□□□ 0.16
Trpm3Q5F4S9 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC16.02■□□□□ 0.16
Trpm3Q5F4S9 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm3Q5F4S9 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm3Q5F4S9 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm3Q5F4S9 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm3Q5F4S9 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm3Q5F4S9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm3Q5F4S9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm3Q5F4S9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm3Q5F4S9 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm3Q5F4S9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm3Q5F4S9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm3Q5F4S9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm3Q5F4S9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trpm3Q5F4S9 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trpm3Q5F4S9 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
Trpm3Q5F4S9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.02■□□□□ 0.15
Trpm3Q5F4S9 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trpm3Q5F4S9 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
Trpm3Q5F4S9 Gm9550-201ENSMUST00000161130 862 ntBASIC16.02■□□□□ 0.15
Trpm3Q5F4S9 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC16.02■□□□□ 0.15
Trpm3Q5F4S9 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
Trpm3Q5F4S9 Gm5369-201ENSMUST00000217499 588 ntBASIC16.02■□□□□ 0.15
Trpm3Q5F4S9 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trpm3Q5F4S9 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trpm3Q5F4S9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trpm3Q5F4S9 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trpm3Q5F4S9 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trpm3Q5F4S9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trpm3Q5F4S9 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trpm3Q5F4S9 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.01■□□□□ 0.15
Trpm3Q5F4S9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trpm3Q5F4S9 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC16.01■□□□□ 0.15
Trpm3Q5F4S9 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms