Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC10.82□□□□□ -0.68
Znf48Q3US17 Gm40466-201ENSMUST00000212174 422 ntBASIC10.82□□□□□ -0.68
Znf48Q3US17 CT572999.1-201ENSMUST00000220315 1260 ntBASIC10.82□□□□□ -0.68
Znf48Q3US17 Gm19189-201ENSMUST00000221689 754 ntBASIC10.82□□□□□ -0.68
Znf48Q3US17 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.82□□□□□ -0.68
Znf48Q3US17 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Znf48Q3US17 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Znf48Q3US17 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Znf48Q3US17 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Znf48Q3US17 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Znf48Q3US17 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Znf48Q3US17 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Znf48Q3US17 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Znf48Q3US17 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Znf48Q3US17 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Znf48Q3US17 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Znf48Q3US17 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Znf48Q3US17 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Znf48Q3US17 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Znf48Q3US17 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Znf48Q3US17 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Znf48Q3US17 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Znf48Q3US17 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Znf48Q3US17 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Znf48Q3US17 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Znf48Q3US17 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.82□□□□□ -0.68
Znf48Q3US17 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Znf48Q3US17 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Znf48Q3US17 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Gm6159-201ENSMUST00000191249 1724 ntBASIC10.81□□□□□ -0.68
Znf48Q3US17 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Znf48Q3US17 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.81□□□□□ -0.68
Znf48Q3US17 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.81□□□□□ -0.68
Znf48Q3US17 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Znf48Q3US17 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.81□□□□□ -0.68
Znf48Q3US17 Gm5187-201ENSMUST00000117317 991 ntBASIC10.81□□□□□ -0.68
Znf48Q3US17 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.81□□□□□ -0.68
Znf48Q3US17 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.81□□□□□ -0.68
Znf48Q3US17 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Znf48Q3US17 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC10.81□□□□□ -0.68
Znf48Q3US17 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.81□□□□□ -0.68
Znf48Q3US17 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.81□□□□□ -0.68
Znf48Q3US17 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC10.81□□□□□ -0.68
Znf48Q3US17 AC154252.1-201ENSMUST00000226041 473 ntBASIC10.81□□□□□ -0.68
Znf48Q3US17 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Znf48Q3US17 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Znf48Q3US17 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Znf48Q3US17 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Znf48Q3US17 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Znf48Q3US17 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Znf48Q3US17 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Znf48Q3US17 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Znf48Q3US17 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Znf48Q3US17 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Znf48Q3US17 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Znf48Q3US17 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Znf48Q3US17 Gm14371-201ENSMUST00000138925 1518 ntBASIC10.8□□□□□ -0.68
Znf48Q3US17 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.8□□□□□ -0.68
Znf48Q3US17 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Znf48Q3US17 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Znf48Q3US17 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Znf48Q3US17 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Znf48Q3US17 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Znf48Q3US17 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Znf48Q3US17 Gm29288-201ENSMUST00000191582 901 ntBASIC10.8□□□□□ -0.68
Znf48Q3US17 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.8□□□□□ -0.68
Znf48Q3US17 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.8□□□□□ -0.68
Znf48Q3US17 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Znf48Q3US17 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Znf48Q3US17 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Znf48Q3US17 Gm6013-201ENSMUST00000212264 699 ntBASIC10.8□□□□□ -0.68
Znf48Q3US17 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Znf48Q3US17 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.8□□□□□ -0.68
Znf48Q3US17 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms