Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Gm4804-201ENSMUST00000182234 999 ntBASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Gm5244-202ENSMUST00000189517 743 ntBASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Gm10766-202ENSMUST00000194123 606 ntBASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa3Q3UPR0 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Gm6218-201ENSMUST00000219812 628 ntBASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa3Q3UPR0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 Gm21854-201ENSMUST00000179901 471 ntBASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.16□□□□□ -0.62
Shisa3Q3UPR0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms