Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.84□□□□□ -0.67
Hoxa3P02831 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.84□□□□□ -0.67
Hoxa3P02831 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.84□□□□□ -0.67
Hoxa3P02831 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hoxa3P02831 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.83□□□□□ -0.68
Hoxa3P02831 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hoxa3P02831 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.83□□□□□ -0.68
Hoxa3P02831 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Hoxa3P02831 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.83□□□□□ -0.68
Hoxa3P02831 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.83□□□□□ -0.68
Hoxa3P02831 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.83□□□□□ -0.68
Hoxa3P02831 Gm25927-201ENSMUST00000175058 117 ntBASIC10.83□□□□□ -0.68
Hoxa3P02831 Gm6222-202ENSMUST00000182143 629 ntBASIC10.83□□□□□ -0.68
Hoxa3P02831 Mir8109-201ENSMUST00000184375 117 ntBASIC10.83□□□□□ -0.68
Hoxa3P02831 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.83□□□□□ -0.68
Hoxa3P02831 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Hoxa3P02831 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.83□□□□□ -0.68
Hoxa3P02831 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Hoxa3P02831 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Hoxa3P02831 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.83□□□□□ -0.68
Hoxa3P02831 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Hoxa3P02831 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.83□□□□□ -0.68
Hoxa3P02831 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Hoxa3P02831 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.83□□□□□ -0.68
Hoxa3P02831 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Hoxa3P02831 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxa3P02831 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxa3P02831 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxa3P02831 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxa3P02831 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxa3P02831 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxa3P02831 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxa3P02831 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.82□□□□□ -0.68
Hoxa3P02831 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxa3P02831 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxa3P02831 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxa3P02831 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxa3P02831 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.82□□□□□ -0.68
Hoxa3P02831 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.82□□□□□ -0.68
Hoxa3P02831 Mir1247-201ENSMUST00000116706 82 ntBASIC10.82□□□□□ -0.68
Hoxa3P02831 Gm16479-201ENSMUST00000121706 932 ntBASIC10.82□□□□□ -0.68
Hoxa3P02831 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.82□□□□□ -0.68
Hoxa3P02831 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxa3P02831 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.82□□□□□ -0.68
Hoxa3P02831 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.82□□□□□ -0.68
Hoxa3P02831 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.82□□□□□ -0.68
Hoxa3P02831 Gm43179-201ENSMUST00000198797 275 ntBASIC10.82□□□□□ -0.68
Hoxa3P02831 Gm43118-201ENSMUST00000199149 775 ntBASIC10.82□□□□□ -0.68
Hoxa3P02831 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.82□□□□□ -0.68
Hoxa3P02831 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxa3P02831 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxa3P02831 Gm6013-201ENSMUST00000212264 699 ntBASIC10.82□□□□□ -0.68
Hoxa3P02831 Gm45930-201ENSMUST00000221330 292 ntBASIC10.82□□□□□ -0.68
Hoxa3P02831 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.82□□□□□ -0.68
Hoxa3P02831 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Hoxa3P02831 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxa3P02831 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxa3P02831 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxa3P02831 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxa3P02831 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxa3P02831 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms