Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ttc3O88196 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ttc3O88196 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ttc3O88196 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ttc3O88196 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ttc3O88196 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Ttc3O88196 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ttc3O88196 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ttc3O88196 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ttc3O88196 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ttc3O88196 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.43□□□□□ -0.26
Ttc3O88196 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ttc3O88196 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ttc3O88196 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ttc3O88196 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ttc3O88196 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ttc3O88196 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ttc3O88196 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ttc3O88196 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ttc3O88196 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.43□□□□□ -0.26
Ttc3O88196 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ttc3O88196 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ttc3O88196 Gm19994-201ENSMUST00000217086 586 ntBASIC13.43□□□□□ -0.26
Ttc3O88196 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.43□□□□□ -0.26
Ttc3O88196 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.43□□□□□ -0.26
Ttc3O88196 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Ttc3O88196 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ttc3O88196 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ttc3O88196 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ttc3O88196 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ttc3O88196 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ttc3O88196 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Ttc3O88196 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Ttc3O88196 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ttc3O88196 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
Ttc3O88196 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ttc3O88196 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ttc3O88196 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.42□□□□□ -0.26
Ttc3O88196 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ttc3O88196 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ttc3O88196 Gm12217-201ENSMUST00000118858 696 ntBASIC13.42□□□□□ -0.26
Ttc3O88196 Gm9083-201ENSMUST00000120423 819 ntBASIC13.42□□□□□ -0.26
Ttc3O88196 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ttc3O88196 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ttc3O88196 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.42□□□□□ -0.26
Ttc3O88196 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ttc3O88196 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ttc3O88196 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ttc3O88196 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ttc3O88196 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ttc3O88196 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.42□□□□□ -0.26
Ttc3O88196 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ttc3O88196 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ttc3O88196 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ttc3O88196 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ttc3O88196 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.42□□□□□ -0.26
Ttc3O88196 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ttc3O88196 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ttc3O88196 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ttc3O88196 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ttc3O88196 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Ttc3O88196 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ttc3O88196 Gm12314-201ENSMUST00000118104 538 ntBASIC13.41□□□□□ -0.26
Ttc3O88196 Gm4909-201ENSMUST00000118749 794 ntBASIC13.41□□□□□ -0.26
Ttc3O88196 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ttc3O88196 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.41□□□□□ -0.26
Ttc3O88196 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.41□□□□□ -0.26
Ttc3O88196 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ttc3O88196 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Ttc3O88196 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.41□□□□□ -0.26
Ttc3O88196 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ttc3O88196 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Ttc3O88196 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ttc3O88196 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Gm23200-201ENSMUST00000104379 132 ntBASIC13.41□□□□□ -0.26
Ttc3O88196 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ttc3O88196 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Ttc3O88196 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.41□□□□□ -0.26
Ttc3O88196 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Ttc3O88196 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.41□□□□□ -0.26
Ttc3O88196 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.41□□□□□ -0.26
Ttc3O88196 Gm18212-201ENSMUST00000211678 889 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms