Protein–RNA interactions for Protein: Q9D516

Ccdc130, Coiled-coil domain-containing protein 130, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc130Q9D516 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.03□□□□□ -0.32
Ccdc130Q9D516 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc130Q9D516 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc130Q9D516 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc130Q9D516 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc130Q9D516 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc130Q9D516 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.02□□□□□ -0.32
Ccdc130Q9D516 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc130Q9D516 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc130Q9D516 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc130Q9D516 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc130Q9D516 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc130Q9D516 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc130Q9D516 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Gm12341-201ENSMUST00000119724 503 ntBASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.01□□□□□ -0.33
Ccdc130Q9D516 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.01□□□□□ -0.33
Ccdc130Q9D516 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc130Q9D516 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc130Q9D516 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc130Q9D516 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc130Q9D516 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13□□□□□ -0.33
Ccdc130Q9D516 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc130Q9D516 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc130Q9D516 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc130Q9D516 Gm43051-201ENSMUST00000201096 2678 ntBASIC13□□□□□ -0.33
Ccdc130Q9D516 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc130Q9D516 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc130Q9D516 Gm7104-201ENSMUST00000179741 2532 ntBASIC13□□□□□ -0.33
Ccdc130Q9D516 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc130Q9D516 Gm19817-201ENSMUST00000199764 2132 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms