Protein–RNA interactions for Protein: Q9D4V4

Taf1d, TATA box-binding protein-associated factor RNA polymerase I subunit D, mousemouse

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1dQ9D4V4 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Taf1dQ9D4V4 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Gm11801-201ENSMUST00000117807 746 ntBASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Gm13600-201ENSMUST00000117949 744 ntBASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Gm14585-201ENSMUST00000120713 634 ntBASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Gm4726-201ENSMUST00000135604 736 ntBASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Gm6019-201ENSMUST00000148369 736 ntBASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Gm23085-201ENSMUST00000157849 293 ntBASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Gm20392-201ENSMUST00000173047 701 ntBASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Gm5852-201ENSMUST00000194119 1021 ntBASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Gm5542-201ENSMUST00000195485 1089 ntBASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Gm17831-201ENSMUST00000205579 900 ntBASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Gm19091-201ENSMUST00000208120 978 ntBASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 AC159376.1-201ENSMUST00000218504 630 ntBASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Taf1dQ9D4V4 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Gm11989-201ENSMUST00000117240 672 ntBASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Gm11362-201ENSMUST00000118838 850 ntBASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Gm11451-201ENSMUST00000118946 630 ntBASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Gm19994-201ENSMUST00000217086 586 ntBASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Taf1dQ9D4V4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Taf1dQ9D4V4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Taf1dQ9D4V4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Taf1dQ9D4V4 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.28■□□□□ 0.04
Taf1dQ9D4V4 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Taf1dQ9D4V4 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC15.28■□□□□ 0.04
Taf1dQ9D4V4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Taf1dQ9D4V4 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Taf1dQ9D4V4 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Taf1dQ9D4V4 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC15.28■□□□□ 0.04
Taf1dQ9D4V4 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC15.28■□□□□ 0.04
Taf1dQ9D4V4 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC15.28■□□□□ 0.04
Taf1dQ9D4V4 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
Taf1dQ9D4V4 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Taf1dQ9D4V4 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms