Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ssu72Q9CY97 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Gm13223-201ENSMUST00000118609 747 ntBASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.82□□□□□ -0.36
Ssu72Q9CY97 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssu72Q9CY97 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssu72Q9CY97 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms