Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Gm13342-201ENSMUST00000121055 207 ntBASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Gm45930-201ENSMUST00000221330 292 ntBASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm7Q9CQQ8 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Gm15370-201ENSMUST00000117158 253 ntBASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Gm4986-201ENSMUST00000119731 549 ntBASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Gm13492-201ENSMUST00000119772 665 ntBASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Gm7046-201ENSMUST00000221351 977 ntBASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms