Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col20a1Q923P0 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.23■□□□□ 0.03
Col20a1Q923P0 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col20a1Q923P0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col20a1Q923P0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Col20a1Q923P0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col20a1Q923P0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col20a1Q923P0 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.22■□□□□ 0.03
Col20a1Q923P0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col20a1Q923P0 Mir877-201ENSMUST00000104738 85 ntBASIC15.22■□□□□ 0.03
Col20a1Q923P0 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Col20a1Q923P0 Gm11531-201ENSMUST00000117614 555 ntBASIC15.22■□□□□ 0.03
Col20a1Q923P0 Gm13813-201ENSMUST00000120998 787 ntBASIC15.22■□□□□ 0.03
Col20a1Q923P0 Gm16296-201ENSMUST00000159905 325 ntBASIC15.22■□□□□ 0.03
Col20a1Q923P0 Gm17376-201ENSMUST00000166016 84 ntBASIC15.22■□□□□ 0.03
Col20a1Q923P0 Gm31256-201ENSMUST00000194705 506 ntBASIC15.22■□□□□ 0.03
Col20a1Q923P0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC15.22■□□□□ 0.03
Col20a1Q923P0 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC15.22■□□□□ 0.03
Col20a1Q923P0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col20a1Q923P0 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col20a1Q923P0 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col20a1Q923P0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col20a1Q923P0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col20a1Q923P0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Col20a1Q923P0 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col20a1Q923P0 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col20a1Q923P0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Col20a1Q923P0 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Col20a1Q923P0 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Col20a1Q923P0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col20a1Q923P0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col20a1Q923P0 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col20a1Q923P0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col20a1Q923P0 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col20a1Q923P0 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col20a1Q923P0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Col20a1Q923P0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col20a1Q923P0 Gm12058-201ENSMUST00000118614 437 ntBASIC15.21■□□□□ 0.03
Col20a1Q923P0 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col20a1Q923P0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col20a1Q923P0 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Col20a1Q923P0 Gm44405-201ENSMUST00000198952 126 ntBASIC15.21■□□□□ 0.03
Col20a1Q923P0 Gm44207-201ENSMUST00000204568 1424 ntBASIC15.21■□□□□ 0.03
Col20a1Q923P0 Gm5950-201ENSMUST00000213337 772 ntBASIC15.21■□□□□ 0.03
Col20a1Q923P0 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col20a1Q923P0 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col20a1Q923P0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col20a1Q923P0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col20a1Q923P0 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Col20a1Q923P0 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col20a1Q923P0 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Col20a1Q923P0 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col20a1Q923P0 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC15.21■□□□□ 0.03
Col20a1Q923P0 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col20a1Q923P0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.21■□□□□ 0.03
Col20a1Q923P0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col20a1Q923P0 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col20a1Q923P0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.21■□□□□ 0.03
Col20a1Q923P0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col20a1Q923P0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.21■□□□□ 0.03
Col20a1Q923P0 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Col20a1Q923P0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Col20a1Q923P0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Col20a1Q923P0 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.21■□□□□ 0.03
Col20a1Q923P0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col20a1Q923P0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Col20a1Q923P0 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Col20a1Q923P0 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col20a1Q923P0 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col20a1Q923P0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Gm25214-201ENSMUST00000104573 129 ntBASIC15.2■□□□□ 0.02
Col20a1Q923P0 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Gm13736-201ENSMUST00000119272 253 ntBASIC15.2■□□□□ 0.02
Col20a1Q923P0 Gm13875-201ENSMUST00000120162 282 ntBASIC15.2■□□□□ 0.02
Col20a1Q923P0 Gm8908-201ENSMUST00000121633 1024 ntBASIC15.2■□□□□ 0.02
Col20a1Q923P0 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC15.2■□□□□ 0.02
Col20a1Q923P0 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Gm6082-201ENSMUST00000215204 454 ntBASIC15.2■□□□□ 0.02
Col20a1Q923P0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col20a1Q923P0 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.2■□□□□ 0.02
Col20a1Q923P0 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Gm6015-201ENSMUST00000217493 1586 ntBASIC15.2■□□□□ 0.02
Col20a1Q923P0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms