Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Gm11425-201ENSMUST00000119608 498 ntBASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Gm37497-201ENSMUST00000195830 798 ntBASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Gm9396-201ENSMUST00000076703 567 ntBASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha3Q91Y16 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdha3Q91Y16 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdha3Q91Y16 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdha3Q91Y16 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.52□□□□□ -0.24
Pcdha3Q91Y16 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Pcdha3Q91Y16 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdha3Q91Y16 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdha3Q91Y16 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdha3Q91Y16 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Pcdha3Q91Y16 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdha3Q91Y16 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdha3Q91Y16 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.52□□□□□ -0.24
Pcdha3Q91Y16 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Pcdha3Q91Y16 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.52□□□□□ -0.24
Pcdha3Q91Y16 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdha3Q91Y16 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Gm13226-201ENSMUST00000117838 404 ntBASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Mir1982-201ENSMUST00000157368 74 ntBASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha3Q91Y16 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms