Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Gm27331-201ENSMUST00000183705 60 ntBASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Gm29127-201ENSMUST00000188304 517 ntBASIC13.22□□□□□ -0.29
Sfr1Q8BP27 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Gm29705-201ENSMUST00000212598 474 ntBASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC13.22□□□□□ -0.29
Sfr1Q8BP27 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.22□□□□□ -0.29
Sfr1Q8BP27 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Gm11978-201ENSMUST00000122315 466 ntBASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sfr1Q8BP27 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sfr1Q8BP27 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sfr1Q8BP27 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sfr1Q8BP27 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sfr1Q8BP27 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sfr1Q8BP27 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sfr1Q8BP27 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Sfr1Q8BP27 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sfr1Q8BP27 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.21□□□□□ -0.3
Sfr1Q8BP27 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sfr1Q8BP27 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sfr1Q8BP27 AC154404.1-201ENSMUST00000223601 2077 ntBASIC13.2□□□□□ -0.3
Sfr1Q8BP27 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sfr1Q8BP27 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sfr1Q8BP27 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Sfr1Q8BP27 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sfr1Q8BP27 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sfr1Q8BP27 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sfr1Q8BP27 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sfr1Q8BP27 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sfr1Q8BP27 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Sfr1Q8BP27 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sfr1Q8BP27 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.2□□□□□ -0.3
Sfr1Q8BP27 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sfr1Q8BP27 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.2□□□□□ -0.3
Sfr1Q8BP27 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Sfr1Q8BP27 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.2□□□□□ -0.3
Sfr1Q8BP27 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sfr1Q8BP27 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sfr1Q8BP27 Gm43818-201ENSMUST00000200605 466 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms