Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Gm16296-201ENSMUST00000159905 325 ntBASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Gm3890-201ENSMUST00000182416 207 ntBASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4dQ8BGV9 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atg4dQ8BGV9 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.02□□□□□ -0.48
Atg4dQ8BGV9 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atg4dQ8BGV9 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atg4dQ8BGV9 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atg4dQ8BGV9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Atg4dQ8BGV9 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atg4dQ8BGV9 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atg4dQ8BGV9 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Atg4dQ8BGV9 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atg4dQ8BGV9 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Gm37008-201ENSMUST00000195712 319 ntBASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Gm24526-201ENSMUST00000082921 158 ntBASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4dQ8BGV9 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms