Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Morn2-202ENSMUST00000227729 656 ntBASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Gm43758-201ENSMUST00000199500 367 ntBASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Gm6334-201ENSMUST00000207083 228 ntBASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubfd1Q78JW9 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ubfd1Q78JW9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ubfd1Q78JW9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Gm11222-201ENSMUST00000119005 738 ntBASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Gm13350-201ENSMUST00000120519 479 ntBASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Gm2991-201ENSMUST00000173338 480 ntBASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Gm6621-201ENSMUST00000193251 772 ntBASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms