Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.97□□□□□ -0.01
Nup98Q6PFD9 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Mir5132-201ENSMUST00000175166 71 ntBASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Mir3547-201ENSMUST00000175461 88 ntBASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup98Q6PFD9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nup98Q6PFD9 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Nup98Q6PFD9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Nup98Q6PFD9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Gm14644-201ENSMUST00000116671 647 ntBASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Gm22334-201ENSMUST00000158070 133 ntBASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Gm23699-201ENSMUST00000158835 135 ntBASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms