Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm20392-201ENSMUST00000173047 701 ntBASIC14.23□□□□□ -0.13
Brca1P48754 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Brca1P48754 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.23□□□□□ -0.13
Brca1P48754 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC14.23□□□□□ -0.13
Brca1P48754 Gm37246-201ENSMUST00000192665 835 ntBASIC14.23□□□□□ -0.13
Brca1P48754 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Brca1P48754 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brca1P48754 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brca1P48754 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brca1P48754 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brca1P48754 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.23□□□□□ -0.13
Brca1P48754 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brca1P48754 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brca1P48754 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brca1P48754 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brca1P48754 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brca1P48754 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Brca1P48754 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brca1P48754 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brca1P48754 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Brca1P48754 Gm24231-201ENSMUST00000104315 133 ntBASIC14.22□□□□□ -0.13
Brca1P48754 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Brca1P48754 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Brca1P48754 Gm10731-201ENSMUST00000181171 448 ntBASIC14.22□□□□□ -0.13
Brca1P48754 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.22□□□□□ -0.13
Brca1P48754 CT030637.1-201ENSMUST00000228016 669 ntBASIC14.22□□□□□ -0.13
Brca1P48754 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brca1P48754 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC14.22□□□□□ -0.13
Brca1P48754 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brca1P48754 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.22□□□□□ -0.13
Brca1P48754 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.22□□□□□ -0.13
Brca1P48754 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Brca1P48754 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Brca1P48754 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Brca1P48754 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Brca1P48754 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brca1P48754 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brca1P48754 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brca1P48754 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Brca1P48754 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brca1P48754 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.22□□□□□ -0.13
Brca1P48754 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brca1P48754 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.22□□□□□ -0.13
Brca1P48754 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brca1P48754 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brca1P48754 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brca1P48754 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.22□□□□□ -0.13
Brca1P48754 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.22□□□□□ -0.13
Brca1P48754 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Brca1P48754 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brca1P48754 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brca1P48754 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC14.22□□□□□ -0.13
Brca1P48754 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Brca1P48754 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Brca1P48754 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Brca1P48754 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.22□□□□□ -0.13
Brca1P48754 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC14.22□□□□□ -0.13
Brca1P48754 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Brca1P48754 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brca1P48754 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brca1P48754 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Brca1P48754 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brca1P48754 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brca1P48754 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brca1P48754 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Brca1P48754 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brca1P48754 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brca1P48754 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brca1P48754 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.21□□□□□ -0.13
Brca1P48754 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brca1P48754 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.21□□□□□ -0.13
Brca1P48754 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brca1P48754 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Brca1P48754 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.21□□□□□ -0.13
Brca1P48754 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Brca1P48754 Gm6485-201ENSMUST00000160676 439 ntBASIC14.21□□□□□ -0.13
Brca1P48754 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.21□□□□□ -0.13
Brca1P48754 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC14.21□□□□□ -0.13
Brca1P48754 Gm18974-201ENSMUST00000221478 1031 ntBASIC14.21□□□□□ -0.13
Brca1P48754 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brca1P48754 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brca1P48754 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brca1P48754 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brca1P48754 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Brca1P48754 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Brca1P48754 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Brca1P48754 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.21□□□□□ -0.14
Brca1P48754 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Brca1P48754 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Brca1P48754 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brca1P48754 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.2□□□□□ -0.14
Brca1P48754 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brca1P48754 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Brca1P48754 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Brca1P48754 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC14.2□□□□□ -0.14
Brca1P48754 Gm15573-201ENSMUST00000119487 540 ntBASIC14.2□□□□□ -0.14
Brca1P48754 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Brca1P48754 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC14.2□□□□□ -0.14
Brca1P48754 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Brca1P48754 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms