Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Msh2P43247 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Msh2P43247 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Msh2P43247 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Msh2P43247 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.33□□□□□ -0.28
Msh2P43247 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Msh2P43247 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Msh2P43247 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.33□□□□□ -0.28
Msh2P43247 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Msh2P43247 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.33□□□□□ -0.28
Msh2P43247 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Msh2P43247 Daam2-202ENSMUST00000224595 1926 ntBASIC13.33□□□□□ -0.28
Msh2P43247 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Msh2P43247 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Msh2P43247 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Msh2P43247 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Msh2P43247 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Msh2P43247 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Msh2P43247 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Msh2P43247 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Msh2P43247 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Msh2P43247 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Msh2P43247 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.32□□□□□ -0.28
Msh2P43247 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Msh2P43247 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Msh2P43247 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Msh2P43247 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Msh2P43247 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.32□□□□□ -0.28
Msh2P43247 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Msh2P43247 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.32□□□□□ -0.28
Msh2P43247 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.32□□□□□ -0.28
Msh2P43247 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Msh2P43247 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Msh2P43247 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.32□□□□□ -0.28
Msh2P43247 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Msh2P43247 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Msh2P43247 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.32□□□□□ -0.28
Msh2P43247 Gm9794-201ENSMUST00000202370 423 ntBASIC13.32□□□□□ -0.28
Msh2P43247 Gm9908-201ENSMUST00000211534 448 ntBASIC13.32□□□□□ -0.28
Msh2P43247 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Msh2P43247 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.32□□□□□ -0.28
Msh2P43247 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Msh2P43247 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Msh2P43247 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Msh2P43247 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Msh2P43247 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.32□□□□□ -0.28
Msh2P43247 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Msh2P43247 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Msh2P43247 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Msh2P43247 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.32□□□□□ -0.28
Msh2P43247 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.32□□□□□ -0.28
Msh2P43247 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Msh2P43247 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Msh2P43247 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Msh2P43247 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Msh2P43247 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Msh2P43247 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msh2P43247 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msh2P43247 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msh2P43247 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msh2P43247 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msh2P43247 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msh2P43247 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msh2P43247 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Msh2P43247 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msh2P43247 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Msh2P43247 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msh2P43247 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.31□□□□□ -0.28
Msh2P43247 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.31□□□□□ -0.28
Msh2P43247 Gm13689-201ENSMUST00000119360 685 ntBASIC13.31□□□□□ -0.28
Msh2P43247 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.31□□□□□ -0.28
Msh2P43247 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msh2P43247 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msh2P43247 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Msh2P43247 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msh2P43247 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Msh2P43247 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Msh2P43247 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.31□□□□□ -0.28
Msh2P43247 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msh2P43247 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msh2P43247 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msh2P43247 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msh2P43247 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msh2P43247 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Msh2P43247 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Msh2P43247 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msh2P43247 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msh2P43247 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Msh2P43247 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msh2P43247 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msh2P43247 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msh2P43247 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msh2P43247 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msh2P43247 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Msh2P43247 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Msh2P43247 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Msh2P43247 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msh2P43247 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msh2P43247 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msh2P43247 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms