Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cxcl12P40224 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl12P40224 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl12P40224 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.23□□□□□ -0.29
Cxcl12P40224 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cxcl12P40224 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl12P40224 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl12P40224 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.23□□□□□ -0.29
Cxcl12P40224 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl12P40224 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Cxcl12P40224 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.23□□□□□ -0.29
Cxcl12P40224 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl12P40224 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl12P40224 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl12P40224 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.23□□□□□ -0.29
Cxcl12P40224 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cxcl12P40224 Gm5616-201ENSMUST00000165252 384 ntBASIC13.23□□□□□ -0.29
Cxcl12P40224 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl12P40224 Gm8741-201ENSMUST00000174736 384 ntBASIC13.23□□□□□ -0.29
Cxcl12P40224 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.23□□□□□ -0.29
Cxcl12P40224 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.23□□□□□ -0.29
Cxcl12P40224 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.23□□□□□ -0.29
Cxcl12P40224 Gm9230-201ENSMUST00000188228 532 ntBASIC13.23□□□□□ -0.29
Cxcl12P40224 Gm45550-201ENSMUST00000209380 946 ntBASIC13.23□□□□□ -0.29
Cxcl12P40224 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.23□□□□□ -0.29
Cxcl12P40224 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cxcl12P40224 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl12P40224 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl12P40224 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl12P40224 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl12P40224 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl12P40224 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.23□□□□□ -0.29
Cxcl12P40224 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl12P40224 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.22□□□□□ -0.29
Cxcl12P40224 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cxcl12P40224 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cxcl12P40224 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cxcl12P40224 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cxcl12P40224 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cxcl12P40224 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.22□□□□□ -0.29
Cxcl12P40224 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cxcl12P40224 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cxcl12P40224 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.22□□□□□ -0.29
Cxcl12P40224 Gm23251-201ENSMUST00000103773 110 ntBASIC13.22□□□□□ -0.29
Cxcl12P40224 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cxcl12P40224 Gm11941-201ENSMUST00000119904 610 ntBASIC13.22□□□□□ -0.29
Cxcl12P40224 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cxcl12P40224 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.22□□□□□ -0.29
Cxcl12P40224 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cxcl12P40224 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cxcl12P40224 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cxcl12P40224 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.22□□□□□ -0.29
Cxcl12P40224 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.22□□□□□ -0.29
Cxcl12P40224 Gm9358-201ENSMUST00000183067 927 ntBASIC13.22□□□□□ -0.29
Cxcl12P40224 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cxcl12P40224 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.22□□□□□ -0.29
Cxcl12P40224 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.22□□□□□ -0.29
Cxcl12P40224 Gm10076-201ENSMUST00000073238 384 ntBASIC13.22□□□□□ -0.29
Cxcl12P40224 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cxcl12P40224 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cxcl12P40224 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cxcl12P40224 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cxcl12P40224 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cxcl12P40224 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cxcl12P40224 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cxcl12P40224 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cxcl12P40224 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cxcl12P40224 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cxcl12P40224 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Cxcl12P40224 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cxcl12P40224 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cxcl12P40224 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cxcl12P40224 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cxcl12P40224 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cxcl12P40224 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cxcl12P40224 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cxcl12P40224 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cxcl12P40224 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cxcl12P40224 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cxcl12P40224 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cxcl12P40224 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Cxcl12P40224 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cxcl12P40224 Gm11675-201ENSMUST00000121873 832 ntBASIC13.21□□□□□ -0.29
Cxcl12P40224 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cxcl12P40224 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.21□□□□□ -0.29
Cxcl12P40224 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.21□□□□□ -0.29
Cxcl12P40224 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cxcl12P40224 Gm18893-201ENSMUST00000198416 943 ntBASIC13.21□□□□□ -0.29
Cxcl12P40224 AC124457.1-201ENSMUST00000198845 120 ntBASIC13.21□□□□□ -0.29
Cxcl12P40224 Gm19931-201ENSMUST00000198920 368 ntBASIC13.21□□□□□ -0.29
Cxcl12P40224 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.21□□□□□ -0.29
Cxcl12P40224 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cxcl12P40224 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.21□□□□□ -0.29
Cxcl12P40224 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.21□□□□□ -0.29
Cxcl12P40224 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms