Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Clk1P22518 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clk1P22518 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Clk1P22518 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.13□□□□□ -0.47
Clk1P22518 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.13□□□□□ -0.47
Clk1P22518 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.13□□□□□ -0.47
Clk1P22518 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.13□□□□□ -0.47
Clk1P22518 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Clk1P22518 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Clk1P22518 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.13□□□□□ -0.47
Clk1P22518 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.13□□□□□ -0.47
Clk1P22518 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.13□□□□□ -0.47
Clk1P22518 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Mir7221-201ENSMUST00000184009 72 ntBASIC12.13□□□□□ -0.47
Clk1P22518 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.13□□□□□ -0.47
Clk1P22518 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.13□□□□□ -0.47
Clk1P22518 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.13□□□□□ -0.47
Clk1P22518 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.13□□□□□ -0.47
Clk1P22518 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.13□□□□□ -0.47
Clk1P22518 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.13□□□□□ -0.47
Clk1P22518 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Clk1P22518 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Clk1P22518 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.13□□□□□ -0.47
Clk1P22518 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Clk1P22518 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Clk1P22518 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clk1P22518 Gm37447-201ENSMUST00000195625 2928 ntBASIC12.13□□□□□ -0.47
Clk1P22518 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Clk1P22518 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Clk1P22518 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Clk1P22518 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Clk1P22518 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.12□□□□□ -0.47
Clk1P22518 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Clk1P22518 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.12□□□□□ -0.47
Clk1P22518 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.12□□□□□ -0.47
Clk1P22518 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.12□□□□□ -0.47
Clk1P22518 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Clk1P22518 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.12□□□□□ -0.47
Clk1P22518 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.12□□□□□ -0.47
Clk1P22518 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Clk1P22518 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.12□□□□□ -0.47
Clk1P22518 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Clk1P22518 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Clk1P22518 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Clk1P22518 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Clk1P22518 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.12□□□□□ -0.47
Clk1P22518 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.12□□□□□ -0.47
Clk1P22518 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clk1P22518 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms