Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdmt1O55055 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdmt1O55055 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdmt1O55055 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.19□□□□□ -0.14
Trdmt1O55055 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdmt1O55055 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.19□□□□□ -0.14
Trdmt1O55055 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.19□□□□□ -0.14
Trdmt1O55055 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trdmt1O55055 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdmt1O55055 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdmt1O55055 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.19□□□□□ -0.14
Trdmt1O55055 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdmt1O55055 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.19□□□□□ -0.14
Trdmt1O55055 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trdmt1O55055 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.18□□□□□ -0.14
Trdmt1O55055 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.18□□□□□ -0.14
Trdmt1O55055 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trdmt1O55055 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trdmt1O55055 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trdmt1O55055 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Trdmt1O55055 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trdmt1O55055 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 Gm13296-201ENSMUST00000117854 997 ntBASIC14.18□□□□□ -0.14
Trdmt1O55055 Gm14832-201ENSMUST00000121289 322 ntBASIC14.18□□□□□ -0.14
Trdmt1O55055 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.18□□□□□ -0.14
Trdmt1O55055 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trdmt1O55055 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.18□□□□□ -0.14
Trdmt1O55055 Rprl1-202ENSMUST00000198476 238 ntBASIC14.18□□□□□ -0.14
Trdmt1O55055 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 Gm8913-201ENSMUST00000209491 641 ntBASIC14.18□□□□□ -0.14
Trdmt1O55055 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trdmt1O55055 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trdmt1O55055 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.18□□□□□ -0.14
Trdmt1O55055 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trdmt1O55055 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.18□□□□□ -0.14
Trdmt1O55055 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdmt1O55055 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.18□□□□□ -0.14
Trdmt1O55055 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdmt1O55055 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trdmt1O55055 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdmt1O55055 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdmt1O55055 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdmt1O55055 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdmt1O55055 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdmt1O55055 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdmt1O55055 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trdmt1O55055 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.17□□□□□ -0.14
Trdmt1O55055 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdmt1O55055 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdmt1O55055 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdmt1O55055 Gm23200-201ENSMUST00000104379 132 ntBASIC14.17□□□□□ -0.14
Trdmt1O55055 Gm9083-201ENSMUST00000120423 819 ntBASIC14.17□□□□□ -0.14
Trdmt1O55055 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.17□□□□□ -0.14
Trdmt1O55055 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.17□□□□□ -0.14
Trdmt1O55055 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.17□□□□□ -0.14
Trdmt1O55055 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.17□□□□□ -0.14
Trdmt1O55055 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.17□□□□□ -0.14
Trdmt1O55055 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdmt1O55055 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trdmt1O55055 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.17□□□□□ -0.14
Trdmt1O55055 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdmt1O55055 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdmt1O55055 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdmt1O55055 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trdmt1O55055 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdmt1O55055 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdmt1O55055 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trdmt1O55055 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdmt1O55055 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdmt1O55055 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdmt1O55055 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.16□□□□□ -0.14
Trdmt1O55055 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdmt1O55055 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdmt1O55055 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdmt1O55055 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdmt1O55055 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trdmt1O55055 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms