Protein–RNA interactions for Protein: F6RGI3

Gm340, Predicted gene 340, mousemouse

Predictions only

Length 1,242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm340F6RGI3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm340F6RGI3 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm340F6RGI3 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm340F6RGI3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.57□□□□□ -0.4
Gm340F6RGI3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.57□□□□□ -0.4
Gm340F6RGI3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.57□□□□□ -0.4
Gm340F6RGI3 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.57□□□□□ -0.4
Gm340F6RGI3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Gm340F6RGI3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm340F6RGI3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.57□□□□□ -0.4
Gm340F6RGI3 Gm11424-201ENSMUST00000121929 829 ntBASIC12.57□□□□□ -0.4
Gm340F6RGI3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.57□□□□□ -0.4
Gm340F6RGI3 Gm45841-201ENSMUST00000207700 164 ntBASIC12.57□□□□□ -0.4
Gm340F6RGI3 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.57□□□□□ -0.4
Gm340F6RGI3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm340F6RGI3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.57□□□□□ -0.4
Gm340F6RGI3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm340F6RGI3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm340F6RGI3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Gm5687-201ENSMUST00000118252 640 ntBASIC12.56□□□□□ -0.4
Gm340F6RGI3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.56□□□□□ -0.4
Gm340F6RGI3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Itm2b-204ENSMUST00000228637 783 ntBASIC12.56□□□□□ -0.4
Gm340F6RGI3 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.56□□□□□ -0.4
Gm340F6RGI3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Gm340F6RGI3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.55□□□□□ -0.4
Gm340F6RGI3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm340F6RGI3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm340F6RGI3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm340F6RGI3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm340F6RGI3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.55□□□□□ -0.4
Gm340F6RGI3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.55□□□□□ -0.4
Gm340F6RGI3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Gm340F6RGI3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm340F6RGI3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Gm340F6RGI3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Gm340F6RGI3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm340F6RGI3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Gm340F6RGI3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm340F6RGI3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm340F6RGI3 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm340F6RGI3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm340F6RGI3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.55□□□□□ -0.4
Gm340F6RGI3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms