Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Shank1D3YZU1 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.58□□□□□ -0.56
Shank1D3YZU1 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Daam2-202ENSMUST00000224595 1926 ntBASIC11.58□□□□□ -0.56
Shank1D3YZU1 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Gm8913-201ENSMUST00000209491 641 ntBASIC11.58□□□□□ -0.56
Shank1D3YZU1 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shank1D3YZU1 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Shank1D3YZU1 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.57□□□□□ -0.56
Shank1D3YZU1 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.57□□□□□ -0.56
Shank1D3YZU1 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Gm9555-201ENSMUST00000200908 583 ntBASIC11.57□□□□□ -0.56
Shank1D3YZU1 Gm45118-201ENSMUST00000208928 825 ntBASIC11.57□□□□□ -0.56
Shank1D3YZU1 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Gm13813-201ENSMUST00000120998 787 ntBASIC11.57□□□□□ -0.56
Shank1D3YZU1 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.57□□□□□ -0.56
Shank1D3YZU1 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shank1D3YZU1 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Gm13875-201ENSMUST00000120162 282 ntBASIC11.56□□□□□ -0.56
Shank1D3YZU1 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Gm7003-201ENSMUST00000195089 312 ntBASIC11.56□□□□□ -0.56
Shank1D3YZU1 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.56□□□□□ -0.56
Shank1D3YZU1 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.56□□□□□ -0.56
Shank1D3YZU1 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shank1D3YZU1 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms