Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm5493S4R2D1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm5493S4R2D1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm5493S4R2D1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm5493S4R2D1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm5493S4R2D1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm5493S4R2D1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm5493S4R2D1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm5493S4R2D1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm5493S4R2D1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm5493S4R2D1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm5493S4R2D1 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.83■□□□□ 0.44
Gm5493S4R2D1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm5493S4R2D1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm5493S4R2D1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5493S4R2D1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5493S4R2D1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5493S4R2D1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5493S4R2D1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.82■□□□□ 0.44
Gm5493S4R2D1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Gm5493S4R2D1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5493S4R2D1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5493S4R2D1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Gm5493S4R2D1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Gm5493S4R2D1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.81■□□□□ 0.44
Gm5493S4R2D1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5493S4R2D1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5493S4R2D1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5493S4R2D1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.81■□□□□ 0.44
Gm5493S4R2D1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5493S4R2D1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Gm5493S4R2D1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Gm5493S4R2D1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5493S4R2D1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5493S4R2D1 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.8■□□□□ 0.44
Gm5493S4R2D1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.8■□□□□ 0.44
Gm5493S4R2D1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.8■□□□□ 0.44
Gm5493S4R2D1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5493S4R2D1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5493S4R2D1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5493S4R2D1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5493S4R2D1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5493S4R2D1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5493S4R2D1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5493S4R2D1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5493S4R2D1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Gm5493S4R2D1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5493S4R2D1 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.79■□□□□ 0.44
Gm5493S4R2D1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5493S4R2D1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5493S4R2D1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Gm5493S4R2D1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Gm5493S4R2D1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5493S4R2D1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.78■□□□□ 0.44
Gm5493S4R2D1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.78■□□□□ 0.44
Gm5493S4R2D1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5493S4R2D1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5493S4R2D1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm5493S4R2D1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Gm5493S4R2D1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm5493S4R2D1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Gm5493S4R2D1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.77■□□□□ 0.44
Gm5493S4R2D1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
Gm5493S4R2D1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.77■□□□□ 0.44
Gm5493S4R2D1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
Gm5493S4R2D1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Gm5493S4R2D1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.77■□□□□ 0.43
Gm5493S4R2D1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm5493S4R2D1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Gm5493S4R2D1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm5493S4R2D1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm5493S4R2D1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.76■□□□□ 0.43
Gm5493S4R2D1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm5493S4R2D1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.76■□□□□ 0.43
Gm5493S4R2D1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm5493S4R2D1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm5493S4R2D1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.76■□□□□ 0.43
Gm5493S4R2D1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm5493S4R2D1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm5493S4R2D1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.75■□□□□ 0.43
Gm5493S4R2D1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm5493S4R2D1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Gm5493S4R2D1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm5493S4R2D1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Gm5493S4R2D1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm5493S4R2D1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm5493S4R2D1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm5493S4R2D1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm5493S4R2D1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm5493S4R2D1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm5493S4R2D1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Gm5493S4R2D1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Gm5493S4R2D1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm5493S4R2D1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Gm5493S4R2D1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gm5493S4R2D1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm5493S4R2D1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.73■□□□□ 0.43
Gm5493S4R2D1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Gm5493S4R2D1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.73■□□□□ 0.43
Gm5493S4R2D1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms