Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mrpl40Q9Z2Q5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Mrpl40Q9Z2Q5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Mrpl40Q9Z2Q5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mrpl40Q9Z2Q5 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mrpl40Q9Z2Q5 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Mrpl40Q9Z2Q5 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Mrpl40Q9Z2Q5 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Mrpl40Q9Z2Q5 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.03■□□□□ 0.96
Mrpl40Q9Z2Q5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.03■□□□□ 0.96
Mrpl40Q9Z2Q5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mrpl40Q9Z2Q5 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Mrpl40Q9Z2Q5 Gm15039-201ENSMUST00000118914 875 ntBASIC21.02■□□□□ 0.96
Mrpl40Q9Z2Q5 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Mrpl40Q9Z2Q5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Mrpl40Q9Z2Q5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
Mrpl40Q9Z2Q5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mrpl40Q9Z2Q5 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Mrpl40Q9Z2Q5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mrpl40Q9Z2Q5 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Mrpl40Q9Z2Q5 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.01■□□□□ 0.95
Mrpl40Q9Z2Q5 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
Mrpl40Q9Z2Q5 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21■□□□□ 0.95
Mrpl40Q9Z2Q5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Mrpl40Q9Z2Q5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Mrpl40Q9Z2Q5 Etf1-202ENSMUST00000180351 108 ntBASIC21■□□□□ 0.95
Mrpl40Q9Z2Q5 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21■□□□□ 0.95
Mrpl40Q9Z2Q5 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21■□□□□ 0.95
Mrpl40Q9Z2Q5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mrpl40Q9Z2Q5 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mrpl40Q9Z2Q5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Mrpl40Q9Z2Q5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mrpl40Q9Z2Q5 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Mrpl40Q9Z2Q5 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mrpl40Q9Z2Q5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mrpl40Q9Z2Q5 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mrpl40Q9Z2Q5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.99■□□□□ 0.95
Mrpl40Q9Z2Q5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.98■□□□□ 0.95
Mrpl40Q9Z2Q5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Mrpl40Q9Z2Q5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mrpl40Q9Z2Q5 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Mrpl40Q9Z2Q5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Mrpl40Q9Z2Q5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mrpl40Q9Z2Q5 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mrpl40Q9Z2Q5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mrpl40Q9Z2Q5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mrpl40Q9Z2Q5 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
Mrpl40Q9Z2Q5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Mrpl40Q9Z2Q5 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Mrpl40Q9Z2Q5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mrpl40Q9Z2Q5 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Mrpl40Q9Z2Q5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.97■□□□□ 0.95
Mrpl40Q9Z2Q5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Mrpl40Q9Z2Q5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mrpl40Q9Z2Q5 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mrpl40Q9Z2Q5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mrpl40Q9Z2Q5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mrpl40Q9Z2Q5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.96■□□□□ 0.95
Mrpl40Q9Z2Q5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Mrpl40Q9Z2Q5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mrpl40Q9Z2Q5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Mrpl40Q9Z2Q5 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mrpl40Q9Z2Q5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mrpl40Q9Z2Q5 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Mrpl40Q9Z2Q5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mrpl40Q9Z2Q5 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mrpl40Q9Z2Q5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Mrpl40Q9Z2Q5 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Mrpl40Q9Z2Q5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mrpl40Q9Z2Q5 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Mrpl40Q9Z2Q5 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Mrpl40Q9Z2Q5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mrpl40Q9Z2Q5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mrpl40Q9Z2Q5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Mrpl40Q9Z2Q5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.94■□□□□ 0.94
Mrpl40Q9Z2Q5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Mrpl40Q9Z2Q5 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.93■□□□□ 0.94
Mrpl40Q9Z2Q5 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mrpl40Q9Z2Q5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mrpl40Q9Z2Q5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Mrpl40Q9Z2Q5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mrpl40Q9Z2Q5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Mrpl40Q9Z2Q5 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mrpl40Q9Z2Q5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mrpl40Q9Z2Q5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mrpl40Q9Z2Q5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.92■□□□□ 0.94
Mrpl40Q9Z2Q5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Mrpl40Q9Z2Q5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.92■□□□□ 0.94
Mrpl40Q9Z2Q5 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mrpl40Q9Z2Q5 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mrpl40Q9Z2Q5 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.92■□□□□ 0.94
Mrpl40Q9Z2Q5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Mrpl40Q9Z2Q5 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mrpl40Q9Z2Q5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.91■□□□□ 0.94
Mrpl40Q9Z2Q5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mrpl40Q9Z2Q5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.91■□□□□ 0.94
Mrpl40Q9Z2Q5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Mrpl40Q9Z2Q5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Mrpl40Q9Z2Q5 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mrpl40Q9Z2Q5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms