Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn6Q9Z262 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.88■□□□□ 0.77
Cldn6Q9Z262 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.88■□□□□ 0.77
Cldn6Q9Z262 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn6Q9Z262 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn6Q9Z262 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn6Q9Z262 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.87■□□□□ 0.77
Cldn6Q9Z262 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Cldn6Q9Z262 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn6Q9Z262 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Cldn6Q9Z262 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn6Q9Z262 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Cldn6Q9Z262 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn6Q9Z262 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn6Q9Z262 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.86■□□□□ 0.77
Cldn6Q9Z262 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.86■□□□□ 0.77
Cldn6Q9Z262 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.86■□□□□ 0.77
Cldn6Q9Z262 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn6Q9Z262 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn6Q9Z262 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Cldn6Q9Z262 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn6Q9Z262 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn6Q9Z262 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn6Q9Z262 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn6Q9Z262 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn6Q9Z262 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn6Q9Z262 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn6Q9Z262 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.83■□□□□ 0.77
Cldn6Q9Z262 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.83■□□□□ 0.77
Cldn6Q9Z262 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.83■□□□□ 0.77
Cldn6Q9Z262 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cldn6Q9Z262 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
Cldn6Q9Z262 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cldn6Q9Z262 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Cldn6Q9Z262 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn6Q9Z262 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.82■□□□□ 0.76
Cldn6Q9Z262 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn6Q9Z262 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn6Q9Z262 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Cldn6Q9Z262 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn6Q9Z262 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn6Q9Z262 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn6Q9Z262 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn6Q9Z262 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn6Q9Z262 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn6Q9Z262 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn6Q9Z262 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Cldn6Q9Z262 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn6Q9Z262 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.8■□□□□ 0.76
Cldn6Q9Z262 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn6Q9Z262 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn6Q9Z262 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Cldn6Q9Z262 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Cldn6Q9Z262 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.79■□□□□ 0.76
Cldn6Q9Z262 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn6Q9Z262 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn6Q9Z262 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn6Q9Z262 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn6Q9Z262 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.79■□□□□ 0.76
Cldn6Q9Z262 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn6Q9Z262 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.79■□□□□ 0.76
Cldn6Q9Z262 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.79■□□□□ 0.76
Cldn6Q9Z262 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn6Q9Z262 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn6Q9Z262 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.79■□□□□ 0.76
Cldn6Q9Z262 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn6Q9Z262 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn6Q9Z262 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn6Q9Z262 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn6Q9Z262 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn6Q9Z262 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.78■□□□□ 0.76
Cldn6Q9Z262 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.78■□□□□ 0.76
Cldn6Q9Z262 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn6Q9Z262 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn6Q9Z262 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.78■□□□□ 0.76
Cldn6Q9Z262 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn6Q9Z262 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn6Q9Z262 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cldn6Q9Z262 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.77■□□□□ 0.76
Cldn6Q9Z262 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldn6Q9Z262 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn6Q9Z262 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.76■□□□□ 0.75
Cldn6Q9Z262 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn6Q9Z262 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn6Q9Z262 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn6Q9Z262 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn6Q9Z262 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn6Q9Z262 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn6Q9Z262 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.76■□□□□ 0.75
Cldn6Q9Z262 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn6Q9Z262 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.75■□□□□ 0.75
Cldn6Q9Z262 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.75■□□□□ 0.75
Cldn6Q9Z262 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.75■□□□□ 0.75
Cldn6Q9Z262 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cldn6Q9Z262 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn6Q9Z262 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn6Q9Z262 Gm45444-201ENSMUST00000211394 898 ntBASIC19.74■□□□□ 0.75
Cldn6Q9Z262 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn6Q9Z262 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn6Q9Z262 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms