Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ap4s1Q9WVL1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.24■□□□□ 0.83
Ap4s1Q9WVL1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ap4s1Q9WVL1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.24■□□□□ 0.83
Ap4s1Q9WVL1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ap4s1Q9WVL1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ap4s1Q9WVL1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Ap4s1Q9WVL1 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.23■□□□□ 0.83
Ap4s1Q9WVL1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ap4s1Q9WVL1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ap4s1Q9WVL1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ap4s1Q9WVL1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.23■□□□□ 0.83
Ap4s1Q9WVL1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ap4s1Q9WVL1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ap4s1Q9WVL1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ap4s1Q9WVL1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ap4s1Q9WVL1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ap4s1Q9WVL1 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.23■□□□□ 0.83
Ap4s1Q9WVL1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ap4s1Q9WVL1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ap4s1Q9WVL1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ap4s1Q9WVL1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ap4s1Q9WVL1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ap4s1Q9WVL1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ap4s1Q9WVL1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ap4s1Q9WVL1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ap4s1Q9WVL1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ap4s1Q9WVL1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ap4s1Q9WVL1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.21■□□□□ 0.83
Ap4s1Q9WVL1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.21■□□□□ 0.83
Ap4s1Q9WVL1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.21■□□□□ 0.83
Ap4s1Q9WVL1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ap4s1Q9WVL1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ap4s1Q9WVL1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Ap4s1Q9WVL1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ap4s1Q9WVL1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ap4s1Q9WVL1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ap4s1Q9WVL1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ap4s1Q9WVL1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ap4s1Q9WVL1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.2■□□□□ 0.82
Ap4s1Q9WVL1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ap4s1Q9WVL1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ap4s1Q9WVL1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ap4s1Q9WVL1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.19■□□□□ 0.82
Ap4s1Q9WVL1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.19■□□□□ 0.82
Ap4s1Q9WVL1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ap4s1Q9WVL1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ap4s1Q9WVL1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ap4s1Q9WVL1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ap4s1Q9WVL1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ap4s1Q9WVL1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ap4s1Q9WVL1 Mir3960-201ENSMUST00000198213 73 ntBASIC20.18■□□□□ 0.82
Ap4s1Q9WVL1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ap4s1Q9WVL1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.18■□□□□ 0.82
Ap4s1Q9WVL1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ap4s1Q9WVL1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ap4s1Q9WVL1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ap4s1Q9WVL1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ap4s1Q9WVL1 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.17■□□□□ 0.82
Ap4s1Q9WVL1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ap4s1Q9WVL1 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.16■□□□□ 0.82
Ap4s1Q9WVL1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.16■□□□□ 0.82
Ap4s1Q9WVL1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ap4s1Q9WVL1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ap4s1Q9WVL1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ap4s1Q9WVL1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Ap4s1Q9WVL1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ap4s1Q9WVL1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ap4s1Q9WVL1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ap4s1Q9WVL1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ap4s1Q9WVL1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ap4s1Q9WVL1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ap4s1Q9WVL1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ap4s1Q9WVL1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.14■□□□□ 0.81
Ap4s1Q9WVL1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ap4s1Q9WVL1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ap4s1Q9WVL1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ap4s1Q9WVL1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Ap4s1Q9WVL1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.13■□□□□ 0.81
Ap4s1Q9WVL1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ap4s1Q9WVL1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ap4s1Q9WVL1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ap4s1Q9WVL1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.13■□□□□ 0.81
Ap4s1Q9WVL1 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.12■□□□□ 0.81
Ap4s1Q9WVL1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ap4s1Q9WVL1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ap4s1Q9WVL1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ap4s1Q9WVL1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ap4s1Q9WVL1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ap4s1Q9WVL1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ap4s1Q9WVL1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Ap4s1Q9WVL1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ap4s1Q9WVL1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ap4s1Q9WVL1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Ap4s1Q9WVL1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.11■□□□□ 0.81
Ap4s1Q9WVL1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ap4s1Q9WVL1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Ap4s1Q9WVL1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ap4s1Q9WVL1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ap4s1Q9WVL1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms