Protein–RNA interactions for Protein: Q9WUT7

Ccr9, C-C chemokine receptor type 9, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9Q9WUT7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccr9Q9WUT7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccr9Q9WUT7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ccr9Q9WUT7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Ccr9Q9WUT7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccr9Q9WUT7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.34■□□□□ 0.53
Ccr9Q9WUT7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.34■□□□□ 0.53
Ccr9Q9WUT7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccr9Q9WUT7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccr9Q9WUT7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccr9Q9WUT7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.33■□□□□ 0.53
Ccr9Q9WUT7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccr9Q9WUT7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccr9Q9WUT7 Gm27502-201ENSMUST00000183495 199 ntBASIC18.33■□□□□ 0.52
Ccr9Q9WUT7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccr9Q9WUT7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccr9Q9WUT7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccr9Q9WUT7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccr9Q9WUT7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccr9Q9WUT7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccr9Q9WUT7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccr9Q9WUT7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccr9Q9WUT7 Notumos-201ENSMUST00000151998 2659 ntBASIC18.32■□□□□ 0.52
Ccr9Q9WUT7 Gm11175-201ENSMUST00000116172 543 ntBASIC18.32■□□□□ 0.52
Ccr9Q9WUT7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.32■□□□□ 0.52
Ccr9Q9WUT7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccr9Q9WUT7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccr9Q9WUT7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.31■□□□□ 0.52
Ccr9Q9WUT7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccr9Q9WUT7 Gm7332-201ENSMUST00000118351 454 ntBASIC18.31■□□□□ 0.52
Ccr9Q9WUT7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.31■□□□□ 0.52
Ccr9Q9WUT7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Ccr9Q9WUT7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccr9Q9WUT7 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.31■□□□□ 0.52
Ccr9Q9WUT7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccr9Q9WUT7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccr9Q9WUT7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccr9Q9WUT7 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.3■□□□□ 0.52
Ccr9Q9WUT7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ccr9Q9WUT7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccr9Q9WUT7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccr9Q9WUT7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccr9Q9WUT7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccr9Q9WUT7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccr9Q9WUT7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccr9Q9WUT7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ccr9Q9WUT7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccr9Q9WUT7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccr9Q9WUT7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccr9Q9WUT7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccr9Q9WUT7 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.29■□□□□ 0.52
Ccr9Q9WUT7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccr9Q9WUT7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccr9Q9WUT7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.29■□□□□ 0.52
Ccr9Q9WUT7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccr9Q9WUT7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccr9Q9WUT7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccr9Q9WUT7 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.29■□□□□ 0.52
Ccr9Q9WUT7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.29■□□□□ 0.52
Ccr9Q9WUT7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccr9Q9WUT7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccr9Q9WUT7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccr9Q9WUT7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccr9Q9WUT7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Ccr9Q9WUT7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccr9Q9WUT7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ccr9Q9WUT7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccr9Q9WUT7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccr9Q9WUT7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccr9Q9WUT7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccr9Q9WUT7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccr9Q9WUT7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Ccr9Q9WUT7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccr9Q9WUT7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccr9Q9WUT7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccr9Q9WUT7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccr9Q9WUT7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccr9Q9WUT7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccr9Q9WUT7 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.27■□□□□ 0.52
Ccr9Q9WUT7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ccr9Q9WUT7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccr9Q9WUT7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ccr9Q9WUT7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ccr9Q9WUT7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccr9Q9WUT7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Ccr9Q9WUT7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Ccr9Q9WUT7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccr9Q9WUT7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Ccr9Q9WUT7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccr9Q9WUT7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.25■□□□□ 0.51
Ccr9Q9WUT7 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.25■□□□□ 0.51
Ccr9Q9WUT7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccr9Q9WUT7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccr9Q9WUT7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Ccr9Q9WUT7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccr9Q9WUT7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccr9Q9WUT7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ccr9Q9WUT7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccr9Q9WUT7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccr9Q9WUT7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms