Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.25■□□□□ 0.83
Lhx9Q9WUH2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx9Q9WUH2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx9Q9WUH2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx9Q9WUH2 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.25■□□□□ 0.83
Lhx9Q9WUH2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx9Q9WUH2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lhx9Q9WUH2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lhx9Q9WUH2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.24■□□□□ 0.83
Lhx9Q9WUH2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lhx9Q9WUH2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lhx9Q9WUH2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lhx9Q9WUH2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lhx9Q9WUH2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lhx9Q9WUH2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lhx9Q9WUH2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lhx9Q9WUH2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lhx9Q9WUH2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.22■□□□□ 0.83
Lhx9Q9WUH2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.22■□□□□ 0.83
Lhx9Q9WUH2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.22■□□□□ 0.83
Lhx9Q9WUH2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Lhx9Q9WUH2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.22■□□□□ 0.83
Lhx9Q9WUH2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lhx9Q9WUH2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lhx9Q9WUH2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lhx9Q9WUH2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
Lhx9Q9WUH2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.21■□□□□ 0.83
Lhx9Q9WUH2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.21■□□□□ 0.83
Lhx9Q9WUH2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lhx9Q9WUH2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lhx9Q9WUH2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lhx9Q9WUH2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Lhx9Q9WUH2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lhx9Q9WUH2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Lhx9Q9WUH2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx9Q9WUH2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx9Q9WUH2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx9Q9WUH2 Gm7417-201ENSMUST00000192950 473 ntBASIC20.2■□□□□ 0.82
Lhx9Q9WUH2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx9Q9WUH2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx9Q9WUH2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx9Q9WUH2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx9Q9WUH2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Lhx9Q9WUH2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx9Q9WUH2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx9Q9WUH2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx9Q9WUH2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx9Q9WUH2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.19■□□□□ 0.82
Lhx9Q9WUH2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx9Q9WUH2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.19■□□□□ 0.82
Lhx9Q9WUH2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx9Q9WUH2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Lhx9Q9WUH2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx9Q9WUH2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Lhx9Q9WUH2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx9Q9WUH2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx9Q9WUH2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Lhx9Q9WUH2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx9Q9WUH2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx9Q9WUH2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.18■□□□□ 0.82
Lhx9Q9WUH2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lhx9Q9WUH2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lhx9Q9WUH2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lhx9Q9WUH2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lhx9Q9WUH2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx9Q9WUH2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx9Q9WUH2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Lhx9Q9WUH2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx9Q9WUH2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx9Q9WUH2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.16■□□□□ 0.82
Lhx9Q9WUH2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.16■□□□□ 0.82
Lhx9Q9WUH2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.16■□□□□ 0.82
Lhx9Q9WUH2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.16■□□□□ 0.82
Lhx9Q9WUH2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx9Q9WUH2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Lhx9Q9WUH2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Lhx9Q9WUH2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.16■□□□□ 0.82
Lhx9Q9WUH2 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.16■□□□□ 0.82
Lhx9Q9WUH2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx9Q9WUH2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx9Q9WUH2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Lhx9Q9WUH2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx9Q9WUH2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lhx9Q9WUH2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.15■□□□□ 0.82
Lhx9Q9WUH2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lhx9Q9WUH2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.15■□□□□ 0.82
Lhx9Q9WUH2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lhx9Q9WUH2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.14■□□□□ 0.81
Lhx9Q9WUH2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lhx9Q9WUH2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lhx9Q9WUH2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lhx9Q9WUH2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lhx9Q9WUH2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.14■□□□□ 0.81
Lhx9Q9WUH2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lhx9Q9WUH2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.14■□□□□ 0.81
Lhx9Q9WUH2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Lhx9Q9WUH2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lhx9Q9WUH2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lhx9Q9WUH2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx9Q9WUH2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms