Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Trim42Q9D2H5 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim42Q9D2H5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.01■□□□□ 0.95
Trim42Q9D2H5 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.01■□□□□ 0.95
Trim42Q9D2H5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim42Q9D2H5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim42Q9D2H5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim42Q9D2H5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim42Q9D2H5 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim42Q9D2H5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21■□□□□ 0.95
Trim42Q9D2H5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim42Q9D2H5 AC154454.1-201ENSMUST00000225253 216 ntBASIC21■□□□□ 0.95
Trim42Q9D2H5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim42Q9D2H5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim42Q9D2H5 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21■□□□□ 0.95
Trim42Q9D2H5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim42Q9D2H5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim42Q9D2H5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim42Q9D2H5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim42Q9D2H5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim42Q9D2H5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.99■□□□□ 0.95
Trim42Q9D2H5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim42Q9D2H5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Trim42Q9D2H5 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Trim42Q9D2H5 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim42Q9D2H5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim42Q9D2H5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Trim42Q9D2H5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim42Q9D2H5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Trim42Q9D2H5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim42Q9D2H5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Trim42Q9D2H5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim42Q9D2H5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Trim42Q9D2H5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Trim42Q9D2H5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Trim42Q9D2H5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim42Q9D2H5 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim42Q9D2H5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim42Q9D2H5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim42Q9D2H5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim42Q9D2H5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Trim42Q9D2H5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Trim42Q9D2H5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Trim42Q9D2H5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
Trim42Q9D2H5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim42Q9D2H5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Trim42Q9D2H5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim42Q9D2H5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim42Q9D2H5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim42Q9D2H5 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim42Q9D2H5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim42Q9D2H5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim42Q9D2H5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim42Q9D2H5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim42Q9D2H5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim42Q9D2H5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim42Q9D2H5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim42Q9D2H5 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim42Q9D2H5 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim42Q9D2H5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim42Q9D2H5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim42Q9D2H5 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim42Q9D2H5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Trim42Q9D2H5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Trim42Q9D2H5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Trim42Q9D2H5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim42Q9D2H5 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim42Q9D2H5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim42Q9D2H5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim42Q9D2H5 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim42Q9D2H5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim42Q9D2H5 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim42Q9D2H5 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim42Q9D2H5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trim42Q9D2H5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Trim42Q9D2H5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
Trim42Q9D2H5 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim42Q9D2H5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim42Q9D2H5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim42Q9D2H5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Trim42Q9D2H5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim42Q9D2H5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim42Q9D2H5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim42Q9D2H5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.89■□□□□ 0.94
Trim42Q9D2H5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim42Q9D2H5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim42Q9D2H5 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim42Q9D2H5 Gm45364-201ENSMUST00000210883 159 ntBASIC20.89■□□□□ 0.93
Trim42Q9D2H5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim42Q9D2H5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim42Q9D2H5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim42Q9D2H5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim42Q9D2H5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim42Q9D2H5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim42Q9D2H5 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim42Q9D2H5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim42Q9D2H5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim42Q9D2H5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim42Q9D2H5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim42Q9D2H5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms