Protein–RNA interactions for Protein: Q9D1D6

Cthrc1, Collagen triple helix repeat-containing protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1Q9D1D6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Cthrc1Q9D1D6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cthrc1Q9D1D6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.76■□□□□ 0.75
Cthrc1Q9D1D6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.76■□□□□ 0.75
Cthrc1Q9D1D6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.76■□□□□ 0.75
Cthrc1Q9D1D6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.76■□□□□ 0.75
Cthrc1Q9D1D6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cthrc1Q9D1D6 Gm15820-201ENSMUST00000201566 728 ntBASIC19.75■□□□□ 0.75
Cthrc1Q9D1D6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cthrc1Q9D1D6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.75■□□□□ 0.75
Cthrc1Q9D1D6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.75■□□□□ 0.75
Cthrc1Q9D1D6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cthrc1Q9D1D6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cthrc1Q9D1D6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cthrc1Q9D1D6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cthrc1Q9D1D6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cthrc1Q9D1D6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cthrc1Q9D1D6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Cthrc1Q9D1D6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cthrc1Q9D1D6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cthrc1Q9D1D6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
Cthrc1Q9D1D6 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.73■□□□□ 0.75
Cthrc1Q9D1D6 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.73■□□□□ 0.75
Cthrc1Q9D1D6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cthrc1Q9D1D6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cthrc1Q9D1D6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cthrc1Q9D1D6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cthrc1Q9D1D6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cthrc1Q9D1D6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cthrc1Q9D1D6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cthrc1Q9D1D6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cthrc1Q9D1D6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cthrc1Q9D1D6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.71■□□□□ 0.75
Cthrc1Q9D1D6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Cthrc1Q9D1D6 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.71■□□□□ 0.75
Cthrc1Q9D1D6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cthrc1Q9D1D6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cthrc1Q9D1D6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cthrc1Q9D1D6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cthrc1Q9D1D6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cthrc1Q9D1D6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cthrc1Q9D1D6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cthrc1Q9D1D6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cthrc1Q9D1D6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cthrc1Q9D1D6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.7■□□□□ 0.74
Cthrc1Q9D1D6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.7■□□□□ 0.74
Cthrc1Q9D1D6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.7■□□□□ 0.74
Cthrc1Q9D1D6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.7■□□□□ 0.74
Cthrc1Q9D1D6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cthrc1Q9D1D6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cthrc1Q9D1D6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cthrc1Q9D1D6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cthrc1Q9D1D6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cthrc1Q9D1D6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cthrc1Q9D1D6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cthrc1Q9D1D6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cthrc1Q9D1D6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.68■□□□□ 0.74
Cthrc1Q9D1D6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.68■□□□□ 0.74
Cthrc1Q9D1D6 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.68■□□□□ 0.74
Cthrc1Q9D1D6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cthrc1Q9D1D6 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.68■□□□□ 0.74
Cthrc1Q9D1D6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Cthrc1Q9D1D6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cthrc1Q9D1D6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cthrc1Q9D1D6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cthrc1Q9D1D6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cthrc1Q9D1D6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cthrc1Q9D1D6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cthrc1Q9D1D6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cthrc1Q9D1D6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cthrc1Q9D1D6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cthrc1Q9D1D6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cthrc1Q9D1D6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cthrc1Q9D1D6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cthrc1Q9D1D6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cthrc1Q9D1D6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cthrc1Q9D1D6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cthrc1Q9D1D6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.66■□□□□ 0.74
Cthrc1Q9D1D6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cthrc1Q9D1D6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cthrc1Q9D1D6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cthrc1Q9D1D6 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.66■□□□□ 0.74
Cthrc1Q9D1D6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cthrc1Q9D1D6 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.66■□□□□ 0.74
Cthrc1Q9D1D6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cthrc1Q9D1D6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cthrc1Q9D1D6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Cthrc1Q9D1D6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cthrc1Q9D1D6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.65■□□□□ 0.74
Cthrc1Q9D1D6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.65■□□□□ 0.74
Cthrc1Q9D1D6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cthrc1Q9D1D6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.65■□□□□ 0.74
Cthrc1Q9D1D6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cthrc1Q9D1D6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cthrc1Q9D1D6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cthrc1Q9D1D6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cthrc1Q9D1D6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cthrc1Q9D1D6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cthrc1Q9D1D6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Cthrc1Q9D1D6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms