Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Lysmd1Q9D0E3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC23.54■■□□□ 1.36
Lysmd1Q9D0E3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC23.54■■□□□ 1.36
Lysmd1Q9D0E3 Gm5576-201ENSMUST00000075809 1236 ntBASIC23.54■■□□□ 1.36
Lysmd1Q9D0E3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Lysmd1Q9D0E3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Lysmd1Q9D0E3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC23.54■■□□□ 1.36
Lysmd1Q9D0E3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Lysmd1Q9D0E3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.53■■□□□ 1.36
Lysmd1Q9D0E3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Lysmd1Q9D0E3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Lysmd1Q9D0E3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Lysmd1Q9D0E3 Gm10129-202ENSMUST00000193100 1316 ntBASIC23.53■■□□□ 1.36
Lysmd1Q9D0E3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC23.52■■□□□ 1.36
Lysmd1Q9D0E3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC23.52■■□□□ 1.36
Lysmd1Q9D0E3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Lysmd1Q9D0E3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Lysmd1Q9D0E3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.35
Lysmd1Q9D0E3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Lysmd1Q9D0E3 AV356131-201ENSMUST00000206201 750 ntBASIC23.51■■□□□ 1.35
Lysmd1Q9D0E3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC23.5■■□□□ 1.35
Lysmd1Q9D0E3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Lysmd1Q9D0E3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.49■■□□□ 1.35
Lysmd1Q9D0E3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Lysmd1Q9D0E3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Lysmd1Q9D0E3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Lysmd1Q9D0E3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Lysmd1Q9D0E3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Lysmd1Q9D0E3 Gm44949-201ENSMUST00000206423 1450 ntBASIC23.49■■□□□ 1.35
Lysmd1Q9D0E3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Lysmd1Q9D0E3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC23.48■■□□□ 1.35
Lysmd1Q9D0E3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Lysmd1Q9D0E3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Lysmd1Q9D0E3 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.47■■□□□ 1.35
Lysmd1Q9D0E3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Lysmd1Q9D0E3 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.47■■□□□ 1.35
Lysmd1Q9D0E3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Lysmd1Q9D0E3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Lysmd1Q9D0E3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Lysmd1Q9D0E3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Lysmd1Q9D0E3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC23.45■■□□□ 1.35
Lysmd1Q9D0E3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Lysmd1Q9D0E3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Lysmd1Q9D0E3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
Lysmd1Q9D0E3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
Lysmd1Q9D0E3 Gm12251-201ENSMUST00000117893 792 ntBASIC23.44■■□□□ 1.34
Lysmd1Q9D0E3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC23.44■■□□□ 1.34
Lysmd1Q9D0E3 Gm9870-201ENSMUST00000063874 645 ntBASIC23.44■■□□□ 1.34
Lysmd1Q9D0E3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Lysmd1Q9D0E3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Lysmd1Q9D0E3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Lysmd1Q9D0E3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
Lysmd1Q9D0E3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Lysmd1Q9D0E3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
Lysmd1Q9D0E3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC23.43■■□□□ 1.34
Lysmd1Q9D0E3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Lysmd1Q9D0E3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Lysmd1Q9D0E3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Lysmd1Q9D0E3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Lysmd1Q9D0E3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.42■■□□□ 1.34
Lysmd1Q9D0E3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC23.42■■□□□ 1.34
Lysmd1Q9D0E3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Lysmd1Q9D0E3 Gm10033-202ENSMUST00000211874 928 ntBASIC23.42■■□□□ 1.34
Lysmd1Q9D0E3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC23.42■■□□□ 1.34
Lysmd1Q9D0E3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Lysmd1Q9D0E3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Lysmd1Q9D0E3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.41■■□□□ 1.34
Lysmd1Q9D0E3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Lysmd1Q9D0E3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Lysmd1Q9D0E3 Gm10653-202ENSMUST00000139570 835 ntBASIC23.41■■□□□ 1.34
Lysmd1Q9D0E3 Gm22240-201ENSMUST00000175225 82 ntBASIC23.41■■□□□ 1.34
Lysmd1Q9D0E3 AC135963.1-201ENSMUST00000211640 717 ntBASIC23.41■■□□□ 1.34
Lysmd1Q9D0E3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Lysmd1Q9D0E3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Lysmd1Q9D0E3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Lysmd1Q9D0E3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Lysmd1Q9D0E3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC23.4■■□□□ 1.34
Lysmd1Q9D0E3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Lysmd1Q9D0E3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Lysmd1Q9D0E3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.39■■□□□ 1.33
Lysmd1Q9D0E3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Lysmd1Q9D0E3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Lysmd1Q9D0E3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Lysmd1Q9D0E3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Lysmd1Q9D0E3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Lysmd1Q9D0E3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Lysmd1Q9D0E3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Lysmd1Q9D0E3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Lysmd1Q9D0E3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Lysmd1Q9D0E3 Gm12933-201ENSMUST00000120203 872 ntBASIC23.37■■□□□ 1.33
Lysmd1Q9D0E3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC23.37■■□□□ 1.33
Lysmd1Q9D0E3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Lysmd1Q9D0E3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Lysmd1Q9D0E3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Lysmd1Q9D0E3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC23.36■■□□□ 1.33
Lysmd1Q9D0E3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC23.36■■□□□ 1.33
Lysmd1Q9D0E3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Lysmd1Q9D0E3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Lysmd1Q9D0E3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC23.35■■□□□ 1.33
Lysmd1Q9D0E3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC23.35■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms