Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl55Q9CZ83 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl55Q9CZ83 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl55Q9CZ83 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl55Q9CZ83 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl55Q9CZ83 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Mrpl55Q9CZ83 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl55Q9CZ83 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl55Q9CZ83 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl55Q9CZ83 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl55Q9CZ83 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Mrpl55Q9CZ83 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl55Q9CZ83 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl55Q9CZ83 Gm14523-201ENSMUST00000117260 558 ntBASIC13.8□□□□□ -0.2
Mrpl55Q9CZ83 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC13.8□□□□□ -0.2
Mrpl55Q9CZ83 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Mrpl55Q9CZ83 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl55Q9CZ83 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl55Q9CZ83 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mrpl55Q9CZ83 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Mrpl55Q9CZ83 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mrpl55Q9CZ83 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mrpl55Q9CZ83 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mrpl55Q9CZ83 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Mrpl55Q9CZ83 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC13.79□□□□□ -0.2
Mrpl55Q9CZ83 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mrpl55Q9CZ83 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mrpl55Q9CZ83 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mrpl55Q9CZ83 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mrpl55Q9CZ83 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mrpl55Q9CZ83 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mrpl55Q9CZ83 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mrpl55Q9CZ83 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC13.78□□□□□ -0.2
Mrpl55Q9CZ83 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC13.78□□□□□ -0.2
Mrpl55Q9CZ83 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mrpl55Q9CZ83 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mrpl55Q9CZ83 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC13.78□□□□□ -0.2
Mrpl55Q9CZ83 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mrpl55Q9CZ83 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Mrpl55Q9CZ83 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mrpl55Q9CZ83 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mrpl55Q9CZ83 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Mrpl55Q9CZ83 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mrpl55Q9CZ83 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Mrpl55Q9CZ83 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Mrpl55Q9CZ83 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC13.77□□□□□ -0.21
Mrpl55Q9CZ83 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Mrpl55Q9CZ83 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Mrpl55Q9CZ83 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Mrpl55Q9CZ83 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Mrpl55Q9CZ83 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Mrpl55Q9CZ83 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Mrpl55Q9CZ83 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Mrpl55Q9CZ83 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Mrpl55Q9CZ83 Gm4419-202ENSMUST00000226239 1431 ntBASIC13.76□□□□□ -0.21
Mrpl55Q9CZ83 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Mrpl55Q9CZ83 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC13.76□□□□□ -0.21
Mrpl55Q9CZ83 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Mrpl55Q9CZ83 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC13.76□□□□□ -0.21
Mrpl55Q9CZ83 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Mrpl55Q9CZ83 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Mrpl55Q9CZ83 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Mrpl55Q9CZ83 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Mrpl55Q9CZ83 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Mrpl55Q9CZ83 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
Mrpl55Q9CZ83 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Mrpl55Q9CZ83 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Mrpl55Q9CZ83 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Mrpl55Q9CZ83 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Mrpl55Q9CZ83 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Mrpl55Q9CZ83 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Mrpl55Q9CZ83 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Mrpl55Q9CZ83 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Mrpl55Q9CZ83 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Mrpl55Q9CZ83 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Mrpl55Q9CZ83 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Mrpl55Q9CZ83 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC13.74□□□□□ -0.21
Mrpl55Q9CZ83 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Mrpl55Q9CZ83 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Mrpl55Q9CZ83 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Mrpl55Q9CZ83 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Mrpl55Q9CZ83 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Mrpl55Q9CZ83 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Mrpl55Q9CZ83 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Mrpl55Q9CZ83 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Mrpl55Q9CZ83 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Mrpl55Q9CZ83 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Mrpl55Q9CZ83 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Mrpl55Q9CZ83 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Mrpl55Q9CZ83 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Mrpl55Q9CZ83 Gm5067-201ENSMUST00000170449 1009 ntBASIC13.73□□□□□ -0.21
Mrpl55Q9CZ83 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC13.73□□□□□ -0.21
Mrpl55Q9CZ83 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Mrpl55Q9CZ83 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Mrpl55Q9CZ83 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Mrpl55Q9CZ83 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Mrpl55Q9CZ83 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Mrpl55Q9CZ83 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mrpl55Q9CZ83 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mrpl55Q9CZ83 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms