Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim13Q9CYB0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim13Q9CYB0 Notumos-201ENSMUST00000151998 2659 ntBASIC19.46■□□□□ 0.71
Trim13Q9CYB0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim13Q9CYB0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trim13Q9CYB0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
Trim13Q9CYB0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim13Q9CYB0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim13Q9CYB0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim13Q9CYB0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim13Q9CYB0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim13Q9CYB0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim13Q9CYB0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim13Q9CYB0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim13Q9CYB0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim13Q9CYB0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trim13Q9CYB0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trim13Q9CYB0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim13Q9CYB0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Trim13Q9CYB0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim13Q9CYB0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim13Q9CYB0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim13Q9CYB0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trim13Q9CYB0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim13Q9CYB0 Gm11599-201ENSMUST00000118720 878 ntBASIC19.43■□□□□ 0.7
Trim13Q9CYB0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.43■□□□□ 0.7
Trim13Q9CYB0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim13Q9CYB0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Trim13Q9CYB0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.43■□□□□ 0.7
Trim13Q9CYB0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim13Q9CYB0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim13Q9CYB0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim13Q9CYB0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim13Q9CYB0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim13Q9CYB0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.42■□□□□ 0.7
Trim13Q9CYB0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trim13Q9CYB0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim13Q9CYB0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim13Q9CYB0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim13Q9CYB0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim13Q9CYB0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Trim13Q9CYB0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim13Q9CYB0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim13Q9CYB0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim13Q9CYB0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim13Q9CYB0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.4■□□□□ 0.7
Trim13Q9CYB0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim13Q9CYB0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim13Q9CYB0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.4■□□□□ 0.7
Trim13Q9CYB0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim13Q9CYB0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trim13Q9CYB0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Trim13Q9CYB0 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.39■□□□□ 0.69
Trim13Q9CYB0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Trim13Q9CYB0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim13Q9CYB0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim13Q9CYB0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim13Q9CYB0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim13Q9CYB0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim13Q9CYB0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim13Q9CYB0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim13Q9CYB0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim13Q9CYB0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim13Q9CYB0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim13Q9CYB0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim13Q9CYB0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Trim13Q9CYB0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.37■□□□□ 0.69
Trim13Q9CYB0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim13Q9CYB0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trim13Q9CYB0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim13Q9CYB0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trim13Q9CYB0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim13Q9CYB0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim13Q9CYB0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim13Q9CYB0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trim13Q9CYB0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trim13Q9CYB0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim13Q9CYB0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim13Q9CYB0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim13Q9CYB0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim13Q9CYB0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim13Q9CYB0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim13Q9CYB0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim13Q9CYB0 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.35■□□□□ 0.69
Trim13Q9CYB0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim13Q9CYB0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim13Q9CYB0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim13Q9CYB0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Trim13Q9CYB0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim13Q9CYB0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim13Q9CYB0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim13Q9CYB0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim13Q9CYB0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trim13Q9CYB0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim13Q9CYB0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trim13Q9CYB0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim13Q9CYB0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim13Q9CYB0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trim13Q9CYB0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim13Q9CYB0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms