Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf135Q9CWS1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf135Q9CWS1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Rnf135Q9CWS1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf135Q9CWS1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf135Q9CWS1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Rnf135Q9CWS1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rnf135Q9CWS1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Rnf135Q9CWS1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rnf135Q9CWS1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Rnf135Q9CWS1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rnf135Q9CWS1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rnf135Q9CWS1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rnf135Q9CWS1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.99■■□□□ 1.11
Rnf135Q9CWS1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rnf135Q9CWS1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rnf135Q9CWS1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rnf135Q9CWS1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.99■■□□□ 1.11
Rnf135Q9CWS1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Rnf135Q9CWS1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Rnf135Q9CWS1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rnf135Q9CWS1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Rnf135Q9CWS1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.98■■□□□ 1.11
Rnf135Q9CWS1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rnf135Q9CWS1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rnf135Q9CWS1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Rnf135Q9CWS1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Rnf135Q9CWS1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rnf135Q9CWS1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rnf135Q9CWS1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rnf135Q9CWS1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rnf135Q9CWS1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Rnf135Q9CWS1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Rnf135Q9CWS1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rnf135Q9CWS1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rnf135Q9CWS1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Rnf135Q9CWS1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rnf135Q9CWS1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Rnf135Q9CWS1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rnf135Q9CWS1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rnf135Q9CWS1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.95■■□□□ 1.1
Rnf135Q9CWS1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rnf135Q9CWS1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf135Q9CWS1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf135Q9CWS1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf135Q9CWS1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf135Q9CWS1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf135Q9CWS1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.94■■□□□ 1.1
Rnf135Q9CWS1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf135Q9CWS1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Rnf135Q9CWS1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Rnf135Q9CWS1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.93■■□□□ 1.1
Rnf135Q9CWS1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rnf135Q9CWS1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rnf135Q9CWS1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rnf135Q9CWS1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rnf135Q9CWS1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rnf135Q9CWS1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
Rnf135Q9CWS1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rnf135Q9CWS1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf135Q9CWS1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.91■■□□□ 1.1
Rnf135Q9CWS1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf135Q9CWS1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf135Q9CWS1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf135Q9CWS1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf135Q9CWS1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf135Q9CWS1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf135Q9CWS1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Rnf135Q9CWS1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf135Q9CWS1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Rnf135Q9CWS1 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.9■■□□□ 1.1
Rnf135Q9CWS1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf135Q9CWS1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rnf135Q9CWS1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rnf135Q9CWS1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf135Q9CWS1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf135Q9CWS1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf135Q9CWS1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf135Q9CWS1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf135Q9CWS1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf135Q9CWS1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf135Q9CWS1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf135Q9CWS1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Rnf135Q9CWS1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf135Q9CWS1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.88■■□□□ 1.09
Rnf135Q9CWS1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.88■■□□□ 1.09
Rnf135Q9CWS1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf135Q9CWS1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf135Q9CWS1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf135Q9CWS1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Rnf135Q9CWS1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf135Q9CWS1 Gm15546-201ENSMUST00000122095 826 ntBASIC21.87■■□□□ 1.09
Rnf135Q9CWS1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Rnf135Q9CWS1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf135Q9CWS1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf135Q9CWS1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf135Q9CWS1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf135Q9CWS1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf135Q9CWS1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf135Q9CWS1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms