Protein–RNA interactions for Protein: Q9CUH1

4930553M12Rik, RIKEN cDNA 4930553M12 gene (Fragment), mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4930553M12RikQ9CUH1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
4930553M12RikQ9CUH1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.93■□□□□ 0.78
4930553M12RikQ9CUH1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
4930553M12RikQ9CUH1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.93■□□□□ 0.78
4930553M12RikQ9CUH1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.93■□□□□ 0.78
4930553M12RikQ9CUH1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.93■□□□□ 0.78
4930553M12RikQ9CUH1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
4930553M12RikQ9CUH1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
4930553M12RikQ9CUH1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
4930553M12RikQ9CUH1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
4930553M12RikQ9CUH1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
4930553M12RikQ9CUH1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
4930553M12RikQ9CUH1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.92■□□□□ 0.78
4930553M12RikQ9CUH1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
4930553M12RikQ9CUH1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
4930553M12RikQ9CUH1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.91■□□□□ 0.78
4930553M12RikQ9CUH1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
4930553M12RikQ9CUH1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
4930553M12RikQ9CUH1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
4930553M12RikQ9CUH1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.91■□□□□ 0.78
4930553M12RikQ9CUH1 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.91■□□□□ 0.78
4930553M12RikQ9CUH1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
4930553M12RikQ9CUH1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
4930553M12RikQ9CUH1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.9■□□□□ 0.78
4930553M12RikQ9CUH1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
4930553M12RikQ9CUH1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
4930553M12RikQ9CUH1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
4930553M12RikQ9CUH1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
4930553M12RikQ9CUH1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
4930553M12RikQ9CUH1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
4930553M12RikQ9CUH1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
4930553M12RikQ9CUH1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
4930553M12RikQ9CUH1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
4930553M12RikQ9CUH1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
4930553M12RikQ9CUH1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
4930553M12RikQ9CUH1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
4930553M12RikQ9CUH1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
4930553M12RikQ9CUH1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
4930553M12RikQ9CUH1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
4930553M12RikQ9CUH1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
4930553M12RikQ9CUH1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.88■□□□□ 0.77
4930553M12RikQ9CUH1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
4930553M12RikQ9CUH1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
4930553M12RikQ9CUH1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
4930553M12RikQ9CUH1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
4930553M12RikQ9CUH1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
4930553M12RikQ9CUH1 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.86■□□□□ 0.77
4930553M12RikQ9CUH1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
4930553M12RikQ9CUH1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.86■□□□□ 0.77
4930553M12RikQ9CUH1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
4930553M12RikQ9CUH1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
4930553M12RikQ9CUH1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
4930553M12RikQ9CUH1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
4930553M12RikQ9CUH1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
4930553M12RikQ9CUH1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
4930553M12RikQ9CUH1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
4930553M12RikQ9CUH1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
4930553M12RikQ9CUH1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
4930553M12RikQ9CUH1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
4930553M12RikQ9CUH1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
4930553M12RikQ9CUH1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.85■□□□□ 0.77
4930553M12RikQ9CUH1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.85■□□□□ 0.77
4930553M12RikQ9CUH1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
4930553M12RikQ9CUH1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
4930553M12RikQ9CUH1 Gm5812-201ENSMUST00000061073 957 ntBASIC19.84■□□□□ 0.77
4930553M12RikQ9CUH1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
4930553M12RikQ9CUH1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
4930553M12RikQ9CUH1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
4930553M12RikQ9CUH1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
4930553M12RikQ9CUH1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
4930553M12RikQ9CUH1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
4930553M12RikQ9CUH1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
4930553M12RikQ9CUH1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
4930553M12RikQ9CUH1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
4930553M12RikQ9CUH1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
4930553M12RikQ9CUH1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
4930553M12RikQ9CUH1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
4930553M12RikQ9CUH1 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.82■□□□□ 0.76
4930553M12RikQ9CUH1 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.82■□□□□ 0.76
4930553M12RikQ9CUH1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
4930553M12RikQ9CUH1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
4930553M12RikQ9CUH1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.82■□□□□ 0.76
4930553M12RikQ9CUH1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
4930553M12RikQ9CUH1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
4930553M12RikQ9CUH1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
4930553M12RikQ9CUH1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.81■□□□□ 0.76
4930553M12RikQ9CUH1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
4930553M12RikQ9CUH1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
4930553M12RikQ9CUH1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
4930553M12RikQ9CUH1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
4930553M12RikQ9CUH1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
4930553M12RikQ9CUH1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
4930553M12RikQ9CUH1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
4930553M12RikQ9CUH1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
4930553M12RikQ9CUH1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
4930553M12RikQ9CUH1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.8■□□□□ 0.76
4930553M12RikQ9CUH1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
4930553M12RikQ9CUH1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.8■□□□□ 0.76
4930553M12RikQ9CUH1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
4930553M12RikQ9CUH1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms