Protein–RNA interactions for Protein: Q9CQM1

Type III endosome membrane protein TEMP, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQM1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Q9CQM1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q9CQM1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q9CQM1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q9CQM1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q9CQM1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q9CQM1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Q9CQM1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q9CQM1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q9CQM1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Q9CQM1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Q9CQM1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.35■□□□□ 0.85
Q9CQM1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.35■□□□□ 0.85
Q9CQM1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Q9CQM1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Q9CQM1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Q9CQM1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Q9CQM1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.34■□□□□ 0.85
Q9CQM1 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.34■□□□□ 0.85
Q9CQM1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Q9CQM1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.34■□□□□ 0.85
Q9CQM1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q9CQM1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Q9CQM1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Q9CQM1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Q9CQM1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Q9CQM1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Q9CQM1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Q9CQM1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.32■□□□□ 0.84
Q9CQM1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.32■□□□□ 0.84
Q9CQM1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q9CQM1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q9CQM1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q9CQM1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.31■□□□□ 0.84
Q9CQM1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q9CQM1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Q9CQM1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Q9CQM1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Q9CQM1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q9CQM1 Gm27405-201ENSMUST00000184201 112 ntBASIC20.31■□□□□ 0.84
Q9CQM1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Q9CQM1 Gm42569-201ENSMUST00000200539 472 ntBASIC20.31■□□□□ 0.84
Q9CQM1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.31■□□□□ 0.84
Q9CQM1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Q9CQM1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.3■□□□□ 0.84
Q9CQM1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.3■□□□□ 0.84
Q9CQM1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Q9CQM1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.3■□□□□ 0.84
Q9CQM1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Q9CQM1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q9CQM1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q9CQM1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q9CQM1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Q9CQM1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q9CQM1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.29■□□□□ 0.84
Q9CQM1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Q9CQM1 Gm26571-201ENSMUST00000181399 666 ntBASIC20.29■□□□□ 0.84
Q9CQM1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q9CQM1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Q9CQM1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CQM1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CQM1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CQM1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CQM1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CQM1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CQM1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Q9CQM1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.28■□□□□ 0.84
Q9CQM1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.27■□□□□ 0.84
Q9CQM1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Q9CQM1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q9CQM1 Gm27011-201ENSMUST00000182352 972 ntBASIC20.27■□□□□ 0.84
Q9CQM1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Q9CQM1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Q9CQM1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.27■□□□□ 0.83
Q9CQM1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CQM1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CQM1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.26■□□□□ 0.83
Q9CQM1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CQM1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Q9CQM1 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.26■□□□□ 0.83
Q9CQM1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CQM1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CQM1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CQM1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CQM1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Q9CQM1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.25■□□□□ 0.83
Q9CQM1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q9CQM1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q9CQM1 Gm43173-201ENSMUST00000202246 593 ntBASIC20.25■□□□□ 0.83
Q9CQM1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Q9CQM1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q9CQM1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Q9CQM1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
Q9CQM1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Q9CQM1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q9CQM1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q9CQM1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Q9CQM1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q9CQM1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Q9CQM1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 290 ms