Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm16437-201ENSMUST00000025669 507 ntBASIC20.64■□□□□ 0.89
Trim8Q99PJ2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim8Q99PJ2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Trim8Q99PJ2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
Trim8Q99PJ2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim8Q99PJ2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.63■□□□□ 0.89
Trim8Q99PJ2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim8Q99PJ2 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.63■□□□□ 0.89
Trim8Q99PJ2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim8Q99PJ2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim8Q99PJ2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim8Q99PJ2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.62■□□□□ 0.89
Trim8Q99PJ2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.62■□□□□ 0.89
Trim8Q99PJ2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim8Q99PJ2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim8Q99PJ2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim8Q99PJ2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim8Q99PJ2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim8Q99PJ2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim8Q99PJ2 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.62■□□□□ 0.89
Trim8Q99PJ2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim8Q99PJ2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trim8Q99PJ2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trim8Q99PJ2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim8Q99PJ2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim8Q99PJ2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim8Q99PJ2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim8Q99PJ2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim8Q99PJ2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
Trim8Q99PJ2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim8Q99PJ2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim8Q99PJ2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim8Q99PJ2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim8Q99PJ2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim8Q99PJ2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.6■□□□□ 0.89
Trim8Q99PJ2 Gm11175-201ENSMUST00000116172 543 ntBASIC20.6■□□□□ 0.89
Trim8Q99PJ2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim8Q99PJ2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim8Q99PJ2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim8Q99PJ2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim8Q99PJ2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim8Q99PJ2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Trim8Q99PJ2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Trim8Q99PJ2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim8Q99PJ2 Gm9806-201ENSMUST00000051080 552 ntBASIC20.59■□□□□ 0.89
Trim8Q99PJ2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim8Q99PJ2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Trim8Q99PJ2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim8Q99PJ2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim8Q99PJ2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim8Q99PJ2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim8Q99PJ2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim8Q99PJ2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim8Q99PJ2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim8Q99PJ2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim8Q99PJ2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim8Q99PJ2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim8Q99PJ2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Trim8Q99PJ2 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.57■□□□□ 0.88
Trim8Q99PJ2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim8Q99PJ2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim8Q99PJ2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim8Q99PJ2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim8Q99PJ2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
Trim8Q99PJ2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.56■□□□□ 0.88
Trim8Q99PJ2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim8Q99PJ2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim8Q99PJ2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim8Q99PJ2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.55■□□□□ 0.88
Trim8Q99PJ2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim8Q99PJ2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Trim8Q99PJ2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.55■□□□□ 0.88
Trim8Q99PJ2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim8Q99PJ2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim8Q99PJ2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim8Q99PJ2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim8Q99PJ2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim8Q99PJ2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim8Q99PJ2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim8Q99PJ2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim8Q99PJ2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim8Q99PJ2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim8Q99PJ2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trim8Q99PJ2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
Trim8Q99PJ2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim8Q99PJ2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim8Q99PJ2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim8Q99PJ2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim8Q99PJ2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim8Q99PJ2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim8Q99PJ2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim8Q99PJ2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim8Q99PJ2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim8Q99PJ2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim8Q99PJ2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim8Q99PJ2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim8Q99PJ2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim8Q99PJ2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim8Q99PJ2 Mir6538-201ENSMUST00000183713 110 ntBASIC20.51■□□□□ 0.87
Trim8Q99PJ2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 290.7 ms