Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm9Q96EQ9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prdm9Q96EQ9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Prdm9Q96EQ9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.92■□□□□ 0.94
Prdm9Q96EQ9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.92■□□□□ 0.94
Prdm9Q96EQ9 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.92■□□□□ 0.94
Prdm9Q96EQ9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prdm9Q96EQ9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prdm9Q96EQ9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prdm9Q96EQ9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prdm9Q96EQ9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Prdm9Q96EQ9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Prdm9Q96EQ9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Prdm9Q96EQ9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Prdm9Q96EQ9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.91■□□□□ 0.94
Prdm9Q96EQ9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prdm9Q96EQ9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prdm9Q96EQ9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prdm9Q96EQ9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prdm9Q96EQ9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prdm9Q96EQ9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.9■□□□□ 0.94
Prdm9Q96EQ9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prdm9Q96EQ9 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.9■□□□□ 0.94
Prdm9Q96EQ9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prdm9Q96EQ9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.9■□□□□ 0.94
Prdm9Q96EQ9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.9■□□□□ 0.94
Prdm9Q96EQ9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Prdm9Q96EQ9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prdm9Q96EQ9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.89■□□□□ 0.93
Prdm9Q96EQ9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prdm9Q96EQ9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prdm9Q96EQ9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prdm9Q96EQ9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Prdm9Q96EQ9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Prdm9Q96EQ9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Prdm9Q96EQ9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prdm9Q96EQ9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.88■□□□□ 0.93
Prdm9Q96EQ9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.88■□□□□ 0.93
Prdm9Q96EQ9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.88■□□□□ 0.93
Prdm9Q96EQ9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prdm9Q96EQ9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Prdm9Q96EQ9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prdm9Q96EQ9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prdm9Q96EQ9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Prdm9Q96EQ9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Prdm9Q96EQ9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.87■□□□□ 0.93
Prdm9Q96EQ9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Prdm9Q96EQ9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prdm9Q96EQ9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.87■□□□□ 0.93
Prdm9Q96EQ9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.87■□□□□ 0.93
Prdm9Q96EQ9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prdm9Q96EQ9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Prdm9Q96EQ9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prdm9Q96EQ9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Prdm9Q96EQ9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prdm9Q96EQ9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.86■□□□□ 0.93
Prdm9Q96EQ9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prdm9Q96EQ9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prdm9Q96EQ9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prdm9Q96EQ9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prdm9Q96EQ9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prdm9Q96EQ9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prdm9Q96EQ9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Prdm9Q96EQ9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prdm9Q96EQ9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prdm9Q96EQ9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prdm9Q96EQ9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prdm9Q96EQ9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Prdm9Q96EQ9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Prdm9Q96EQ9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prdm9Q96EQ9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prdm9Q96EQ9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prdm9Q96EQ9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prdm9Q96EQ9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Prdm9Q96EQ9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prdm9Q96EQ9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Prdm9Q96EQ9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Prdm9Q96EQ9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Prdm9Q96EQ9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prdm9Q96EQ9 Gm22238-201ENSMUST00000175222 88 ntBASIC20.82■□□□□ 0.92
Prdm9Q96EQ9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prdm9Q96EQ9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Prdm9Q96EQ9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prdm9Q96EQ9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Prdm9Q96EQ9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.81■□□□□ 0.92
Prdm9Q96EQ9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.81■□□□□ 0.92
Prdm9Q96EQ9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.81■□□□□ 0.92
Prdm9Q96EQ9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prdm9Q96EQ9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.81■□□□□ 0.92
Prdm9Q96EQ9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prdm9Q96EQ9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prdm9Q96EQ9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prdm9Q96EQ9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Prdm9Q96EQ9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prdm9Q96EQ9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.8■□□□□ 0.92
Prdm9Q96EQ9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prdm9Q96EQ9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Prdm9Q96EQ9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prdm9Q96EQ9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Prdm9Q96EQ9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms