Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.69■□□□□ 0.9
Pcdhga4Q91XY4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhga4Q91XY4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhga4Q91XY4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhga4Q91XY4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhga4Q91XY4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhga4Q91XY4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhga4Q91XY4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhga4Q91XY4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga4Q91XY4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga4Q91XY4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Pcdhga4Q91XY4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Pcdhga4Q91XY4 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.68■□□□□ 0.9
Pcdhga4Q91XY4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga4Q91XY4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga4Q91XY4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga4Q91XY4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Pcdhga4Q91XY4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga4Q91XY4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga4Q91XY4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga4Q91XY4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga4Q91XY4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga4Q91XY4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.67■□□□□ 0.9
Pcdhga4Q91XY4 Gm10232-201ENSMUST00000089221 720 ntBASIC20.67■□□□□ 0.9
Pcdhga4Q91XY4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga4Q91XY4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga4Q91XY4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga4Q91XY4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga4Q91XY4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga4Q91XY4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Pcdhga4Q91XY4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Pcdhga4Q91XY4 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.66■□□□□ 0.9
Pcdhga4Q91XY4 Gm15820-201ENSMUST00000201566 728 ntBASIC20.66■□□□□ 0.9
Pcdhga4Q91XY4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga4Q91XY4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga4Q91XY4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga4Q91XY4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga4Q91XY4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.64■□□□□ 0.9
Pcdhga4Q91XY4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga4Q91XY4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.64■□□□□ 0.89
Pcdhga4Q91XY4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga4Q91XY4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Pcdhga4Q91XY4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga4Q91XY4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Pcdhga4Q91XY4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga4Q91XY4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhga4Q91XY4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga4Q91XY4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga4Q91XY4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga4Q91XY4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga4Q91XY4 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.63■□□□□ 0.89
Pcdhga4Q91XY4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.63■□□□□ 0.89
Pcdhga4Q91XY4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga4Q91XY4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga4Q91XY4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.63■□□□□ 0.89
Pcdhga4Q91XY4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga4Q91XY4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga4Q91XY4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Pcdhga4Q91XY4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga4Q91XY4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga4Q91XY4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.62■□□□□ 0.89
Pcdhga4Q91XY4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga4Q91XY4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcdhga4Q91XY4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga4Q91XY4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
Pcdhga4Q91XY4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Pcdhga4Q91XY4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga4Q91XY4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Pcdhga4Q91XY4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga4Q91XY4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga4Q91XY4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga4Q91XY4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga4Q91XY4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga4Q91XY4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga4Q91XY4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.6■□□□□ 0.89
Pcdhga4Q91XY4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga4Q91XY4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga4Q91XY4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.59■□□□□ 0.89
Pcdhga4Q91XY4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga4Q91XY4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga4Q91XY4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga4Q91XY4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga4Q91XY4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga4Q91XY4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga4Q91XY4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga4Q91XY4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhga4Q91XY4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhga4Q91XY4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Pcdhga4Q91XY4 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.58■□□□□ 0.89
Pcdhga4Q91XY4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhga4Q91XY4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhga4Q91XY4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhga4Q91XY4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Pcdhga4Q91XY4 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.57■□□□□ 0.88
Pcdhga4Q91XY4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga4Q91XY4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga4Q91XY4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga4Q91XY4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga4Q91XY4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Pcdhga4Q91XY4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 175.3 ms