Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgb2Q91XX7 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.85■□□□□ 0.77
Pcdhgb2Q91XX7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgb2Q91XX7 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgb2Q91XX7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgb2Q91XX7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Pcdhgb2Q91XX7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgb2Q91XX7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgb2Q91XX7 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgb2Q91XX7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.84■□□□□ 0.77
Pcdhgb2Q91XX7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgb2Q91XX7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgb2Q91XX7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Pcdhgb2Q91XX7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgb2Q91XX7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhgb2Q91XX7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhgb2Q91XX7 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.83■□□□□ 0.77
Pcdhgb2Q91XX7 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.83■□□□□ 0.77
Pcdhgb2Q91XX7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhgb2Q91XX7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhgb2Q91XX7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.83■□□□□ 0.76
Pcdhgb2Q91XX7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgb2Q91XX7 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgb2Q91XX7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgb2Q91XX7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgb2Q91XX7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Pcdhgb2Q91XX7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Pcdhgb2Q91XX7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgb2Q91XX7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgb2Q91XX7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgb2Q91XX7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgb2Q91XX7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.81■□□□□ 0.76
Pcdhgb2Q91XX7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Pcdhgb2Q91XX7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Pcdhgb2Q91XX7 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgb2Q91XX7 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgb2Q91XX7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhgb2Q91XX7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhgb2Q91XX7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgb2Q91XX7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgb2Q91XX7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgb2Q91XX7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgb2Q91XX7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb2Q91XX7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb2Q91XX7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb2Q91XX7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
Pcdhgb2Q91XX7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb2Q91XX7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pcdhgb2Q91XX7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Pcdhgb2Q91XX7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb2Q91XX7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb2Q91XX7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Pcdhgb2Q91XX7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.78■□□□□ 0.76
Pcdhgb2Q91XX7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb2Q91XX7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb2Q91XX7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb2Q91XX7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb2Q91XX7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb2Q91XX7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb2Q91XX7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb2Q91XX7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.77■□□□□ 0.76
Pcdhgb2Q91XX7 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb2Q91XX7 Gm6311-201ENSMUST00000073790 878 ntBASIC19.77■□□□□ 0.76
Pcdhgb2Q91XX7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb2Q91XX7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb2Q91XX7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb2Q91XX7 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.77■□□□□ 0.76
Pcdhgb2Q91XX7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb2Q91XX7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdhgb2Q91XX7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb2Q91XX7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb2Q91XX7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb2Q91XX7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb2Q91XX7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb2Q91XX7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb2Q91XX7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb2Q91XX7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.76■□□□□ 0.75
Pcdhgb2Q91XX7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdhgb2Q91XX7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb2Q91XX7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb2Q91XX7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhgb2Q91XX7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb2Q91XX7 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb2Q91XX7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhgb2Q91XX7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhgb2Q91XX7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.75■□□□□ 0.75
Pcdhgb2Q91XX7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb2Q91XX7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb2Q91XX7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb2Q91XX7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb2Q91XX7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb2Q91XX7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb2Q91XX7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb2Q91XX7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb2Q91XX7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb2Q91XX7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb2Q91XX7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb2Q91XX7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb2Q91XX7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb2Q91XX7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms