Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.72■□□□□ 0.59
Odf4Q8VI88 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Odf4Q8VI88 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Odf4Q8VI88 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.71■□□□□ 0.59
Odf4Q8VI88 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
Odf4Q8VI88 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Odf4Q8VI88 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Odf4Q8VI88 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Odf4Q8VI88 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Odf4Q8VI88 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Odf4Q8VI88 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Odf4Q8VI88 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Odf4Q8VI88 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.71■□□□□ 0.59
Odf4Q8VI88 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.71■□□□□ 0.59
Odf4Q8VI88 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Odf4Q8VI88 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Odf4Q8VI88 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Odf4Q8VI88 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Odf4Q8VI88 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Odf4Q8VI88 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Odf4Q8VI88 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.7■□□□□ 0.58
Odf4Q8VI88 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.7■□□□□ 0.58
Odf4Q8VI88 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Odf4Q8VI88 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Odf4Q8VI88 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Odf4Q8VI88 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Odf4Q8VI88 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.69■□□□□ 0.58
Odf4Q8VI88 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Odf4Q8VI88 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Odf4Q8VI88 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Odf4Q8VI88 Gm22567-201ENSMUST00000175542 342 ntBASIC18.69■□□□□ 0.58
Odf4Q8VI88 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Odf4Q8VI88 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Odf4Q8VI88 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Odf4Q8VI88 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.68■□□□□ 0.58
Odf4Q8VI88 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Odf4Q8VI88 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Odf4Q8VI88 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Odf4Q8VI88 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Odf4Q8VI88 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Odf4Q8VI88 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Odf4Q8VI88 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Odf4Q8VI88 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Odf4Q8VI88 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Odf4Q8VI88 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Odf4Q8VI88 Gm13238-201ENSMUST00000117655 780 ntBASIC18.67■□□□□ 0.58
Odf4Q8VI88 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.67■□□□□ 0.58
Odf4Q8VI88 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.67■□□□□ 0.58
Odf4Q8VI88 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Odf4Q8VI88 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Odf4Q8VI88 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Odf4Q8VI88 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Odf4Q8VI88 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Odf4Q8VI88 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Odf4Q8VI88 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Odf4Q8VI88 Gm45444-201ENSMUST00000211394 898 ntBASIC18.66■□□□□ 0.58
Odf4Q8VI88 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Odf4Q8VI88 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.66■□□□□ 0.58
Odf4Q8VI88 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Odf4Q8VI88 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Odf4Q8VI88 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Odf4Q8VI88 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Odf4Q8VI88 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Odf4Q8VI88 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Odf4Q8VI88 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Odf4Q8VI88 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Odf4Q8VI88 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Odf4Q8VI88 Gm43566-201ENSMUST00000196851 808 ntBASIC18.65■□□□□ 0.58
Odf4Q8VI88 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Odf4Q8VI88 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Odf4Q8VI88 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Odf4Q8VI88 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Odf4Q8VI88 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Odf4Q8VI88 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.64■□□□□ 0.57
Odf4Q8VI88 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Odf4Q8VI88 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.64■□□□□ 0.57
Odf4Q8VI88 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.64■□□□□ 0.57
Odf4Q8VI88 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.64■□□□□ 0.57
Odf4Q8VI88 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Odf4Q8VI88 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Odf4Q8VI88 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Odf4Q8VI88 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Odf4Q8VI88 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Odf4Q8VI88 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Odf4Q8VI88 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.63■□□□□ 0.57
Odf4Q8VI88 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
Odf4Q8VI88 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Odf4Q8VI88 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Odf4Q8VI88 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.63■□□□□ 0.57
Odf4Q8VI88 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Odf4Q8VI88 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Odf4Q8VI88 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Odf4Q8VI88 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Odf4Q8VI88 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Odf4Q8VI88 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Odf4Q8VI88 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Odf4Q8VI88 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.62■□□□□ 0.57
Odf4Q8VI88 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Odf4Q8VI88 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Odf4Q8VI88 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms