Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdhr1Q8VHP6 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.68■□□□□ 0.9
Cdhr1Q8VHP6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cdhr1Q8VHP6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdhr1Q8VHP6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdhr1Q8VHP6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdhr1Q8VHP6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdhr1Q8VHP6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Cdhr1Q8VHP6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdhr1Q8VHP6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdhr1Q8VHP6 Gm13241-201ENSMUST00000094493 780 ntBASIC20.66■□□□□ 0.9
Cdhr1Q8VHP6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdhr1Q8VHP6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdhr1Q8VHP6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cdhr1Q8VHP6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdhr1Q8VHP6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdhr1Q8VHP6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdhr1Q8VHP6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdhr1Q8VHP6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.65■□□□□ 0.9
Cdhr1Q8VHP6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdhr1Q8VHP6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdhr1Q8VHP6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cdhr1Q8VHP6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.65■□□□□ 0.9
Cdhr1Q8VHP6 Gm9847-201ENSMUST00000052528 599 ntBASIC20.65■□□□□ 0.9
Cdhr1Q8VHP6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Cdhr1Q8VHP6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cdhr1Q8VHP6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.64■□□□□ 0.89
Cdhr1Q8VHP6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdhr1Q8VHP6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdhr1Q8VHP6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdhr1Q8VHP6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdhr1Q8VHP6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdhr1Q8VHP6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdhr1Q8VHP6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdhr1Q8VHP6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdhr1Q8VHP6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdhr1Q8VHP6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdhr1Q8VHP6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdhr1Q8VHP6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cdhr1Q8VHP6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdhr1Q8VHP6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cdhr1Q8VHP6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.63■□□□□ 0.89
Cdhr1Q8VHP6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdhr1Q8VHP6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cdhr1Q8VHP6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdhr1Q8VHP6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdhr1Q8VHP6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdhr1Q8VHP6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdhr1Q8VHP6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdhr1Q8VHP6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.62■□□□□ 0.89
Cdhr1Q8VHP6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdhr1Q8VHP6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Cdhr1Q8VHP6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdhr1Q8VHP6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Cdhr1Q8VHP6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Cdhr1Q8VHP6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cdhr1Q8VHP6 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.61■□□□□ 0.89
Cdhr1Q8VHP6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Cdhr1Q8VHP6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.61■□□□□ 0.89
Cdhr1Q8VHP6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.61■□□□□ 0.89
Cdhr1Q8VHP6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdhr1Q8VHP6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdhr1Q8VHP6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Cdhr1Q8VHP6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdhr1Q8VHP6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdhr1Q8VHP6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdhr1Q8VHP6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdhr1Q8VHP6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Cdhr1Q8VHP6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdhr1Q8VHP6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdhr1Q8VHP6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdhr1Q8VHP6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdhr1Q8VHP6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.59■□□□□ 0.89
Cdhr1Q8VHP6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdhr1Q8VHP6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.59■□□□□ 0.89
Cdhr1Q8VHP6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdhr1Q8VHP6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdhr1Q8VHP6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdhr1Q8VHP6 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.58■□□□□ 0.89
Cdhr1Q8VHP6 Gm21956-201ENSMUST00000179946 522 ntBASIC20.58■□□□□ 0.89
Cdhr1Q8VHP6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Cdhr1Q8VHP6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cdhr1Q8VHP6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdhr1Q8VHP6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdhr1Q8VHP6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdhr1Q8VHP6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdhr1Q8VHP6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Cdhr1Q8VHP6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdhr1Q8VHP6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdhr1Q8VHP6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdhr1Q8VHP6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdhr1Q8VHP6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdhr1Q8VHP6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdhr1Q8VHP6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.57■□□□□ 0.88
Cdhr1Q8VHP6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdhr1Q8VHP6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cdhr1Q8VHP6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.56■□□□□ 0.88
Cdhr1Q8VHP6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdhr1Q8VHP6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdhr1Q8VHP6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms