Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Upb1Q8VC97 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Upb1Q8VC97 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Upb1Q8VC97 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Upb1Q8VC97 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Upb1Q8VC97 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Upb1Q8VC97 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Upb1Q8VC97 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Upb1Q8VC97 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Upb1Q8VC97 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.1■■□□□ 1.29
Upb1Q8VC97 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Upb1Q8VC97 AC158990.1-201ENSMUST00000221450 2016 ntBASIC23.1■■□□□ 1.29
Upb1Q8VC97 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Upb1Q8VC97 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.1■■□□□ 1.29
Upb1Q8VC97 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Upb1Q8VC97 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
Upb1Q8VC97 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC23.09■■□□□ 1.29
Upb1Q8VC97 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Upb1Q8VC97 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Upb1Q8VC97 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Upb1Q8VC97 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.08■■□□□ 1.29
Upb1Q8VC97 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Upb1Q8VC97 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Upb1Q8VC97 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Upb1Q8VC97 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC23.08■■□□□ 1.29
Upb1Q8VC97 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC23.08■■□□□ 1.29
Upb1Q8VC97 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Upb1Q8VC97 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Upb1Q8VC97 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Upb1Q8VC97 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Upb1Q8VC97 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC23.07■■□□□ 1.28
Upb1Q8VC97 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Upb1Q8VC97 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Upb1Q8VC97 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.07■■□□□ 1.28
Upb1Q8VC97 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Upb1Q8VC97 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Upb1Q8VC97 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Upb1Q8VC97 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.06■■□□□ 1.28
Upb1Q8VC97 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Upb1Q8VC97 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC23.06■■□□□ 1.28
Upb1Q8VC97 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Upb1Q8VC97 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Upb1Q8VC97 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Upb1Q8VC97 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Upb1Q8VC97 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC23.05■■□□□ 1.28
Upb1Q8VC97 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Upb1Q8VC97 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Upb1Q8VC97 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Upb1Q8VC97 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Upb1Q8VC97 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Upb1Q8VC97 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC23.04■■□□□ 1.28
Upb1Q8VC97 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Upb1Q8VC97 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Upb1Q8VC97 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Upb1Q8VC97 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.03■■□□□ 1.28
Upb1Q8VC97 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
Upb1Q8VC97 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Upb1Q8VC97 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC23.03■■□□□ 1.28
Upb1Q8VC97 Gm22238-201ENSMUST00000175222 88 ntBASIC23.03■■□□□ 1.28
Upb1Q8VC97 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Upb1Q8VC97 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Upb1Q8VC97 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC23.02■■□□□ 1.28
Upb1Q8VC97 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Upb1Q8VC97 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Upb1Q8VC97 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Upb1Q8VC97 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Upb1Q8VC97 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Upb1Q8VC97 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Upb1Q8VC97 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Upb1Q8VC97 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Upb1Q8VC97 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Upb1Q8VC97 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC23.01■■□□□ 1.27
Upb1Q8VC97 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Upb1Q8VC97 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Upb1Q8VC97 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Upb1Q8VC97 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23■■□□□ 1.27
Upb1Q8VC97 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23■■□□□ 1.27
Upb1Q8VC97 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC23■■□□□ 1.27
Upb1Q8VC97 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Upb1Q8VC97 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC23■■□□□ 1.27
Upb1Q8VC97 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC23■■□□□ 1.27
Upb1Q8VC97 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
Upb1Q8VC97 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Upb1Q8VC97 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Upb1Q8VC97 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Upb1Q8VC97 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Upb1Q8VC97 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Upb1Q8VC97 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Upb1Q8VC97 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Upb1Q8VC97 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Upb1Q8VC97 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Upb1Q8VC97 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Upb1Q8VC97 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Upb1Q8VC97 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Upb1Q8VC97 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Upb1Q8VC97 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.97■■□□□ 1.27
Upb1Q8VC97 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Upb1Q8VC97 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Upb1Q8VC97 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
Upb1Q8VC97 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms