Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc58Q8R3Q6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.86■□□□□ 0.61
Ccdc58Q8R3Q6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.85■□□□□ 0.61
Ccdc58Q8R3Q6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ccdc58Q8R3Q6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc58Q8R3Q6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.85■□□□□ 0.61
Ccdc58Q8R3Q6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc58Q8R3Q6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc58Q8R3Q6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc58Q8R3Q6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc58Q8R3Q6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc58Q8R3Q6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc58Q8R3Q6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.85■□□□□ 0.61
Ccdc58Q8R3Q6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc58Q8R3Q6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc58Q8R3Q6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc58Q8R3Q6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc58Q8R3Q6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc58Q8R3Q6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc58Q8R3Q6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc58Q8R3Q6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc58Q8R3Q6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc58Q8R3Q6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Ccdc58Q8R3Q6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc58Q8R3Q6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc58Q8R3Q6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc58Q8R3Q6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Ccdc58Q8R3Q6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc58Q8R3Q6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc58Q8R3Q6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc58Q8R3Q6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.82■□□□□ 0.6
Ccdc58Q8R3Q6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc58Q8R3Q6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc58Q8R3Q6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc58Q8R3Q6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc58Q8R3Q6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Ccdc58Q8R3Q6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc58Q8R3Q6 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.81■□□□□ 0.6
Ccdc58Q8R3Q6 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.81■□□□□ 0.6
Ccdc58Q8R3Q6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc58Q8R3Q6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc58Q8R3Q6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc58Q8R3Q6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc58Q8R3Q6 Gm7432-201ENSMUST00000210343 879 ntBASIC18.81■□□□□ 0.6
Ccdc58Q8R3Q6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ccdc58Q8R3Q6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc58Q8R3Q6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc58Q8R3Q6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc58Q8R3Q6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc58Q8R3Q6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc58Q8R3Q6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
Ccdc58Q8R3Q6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc58Q8R3Q6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.8■□□□□ 0.6
Ccdc58Q8R3Q6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ccdc58Q8R3Q6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc58Q8R3Q6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc58Q8R3Q6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ccdc58Q8R3Q6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.79■□□□□ 0.6
Ccdc58Q8R3Q6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc58Q8R3Q6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc58Q8R3Q6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.79■□□□□ 0.6
Ccdc58Q8R3Q6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc58Q8R3Q6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc58Q8R3Q6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc58Q8R3Q6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc58Q8R3Q6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc58Q8R3Q6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc58Q8R3Q6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc58Q8R3Q6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc58Q8R3Q6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc58Q8R3Q6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc58Q8R3Q6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc58Q8R3Q6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
Ccdc58Q8R3Q6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc58Q8R3Q6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc58Q8R3Q6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ccdc58Q8R3Q6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc58Q8R3Q6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Ccdc58Q8R3Q6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Ccdc58Q8R3Q6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc58Q8R3Q6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc58Q8R3Q6 Gm11599-201ENSMUST00000118720 878 ntBASIC18.76■□□□□ 0.59
Ccdc58Q8R3Q6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.76■□□□□ 0.59
Ccdc58Q8R3Q6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc58Q8R3Q6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc58Q8R3Q6 Golph3-202ENSMUST00000226517 2359 ntBASIC18.76■□□□□ 0.59
Ccdc58Q8R3Q6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc58Q8R3Q6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc58Q8R3Q6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ccdc58Q8R3Q6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc58Q8R3Q6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc58Q8R3Q6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ccdc58Q8R3Q6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc58Q8R3Q6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.75■□□□□ 0.59
Ccdc58Q8R3Q6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc58Q8R3Q6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc58Q8R3Q6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc58Q8R3Q6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc58Q8R3Q6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ccdc58Q8R3Q6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms